Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFAP04085 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFAP04085 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.17□□□□□ -1.58
PDGFAP04085 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFAP04085 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFAP04085 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PDGFAP04085 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.16□□□□□ -1.58
PDGFAP04085 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFAP04085 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFAP04085 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFAP04085 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFAP04085 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFAP04085 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFAP04085 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
PDGFAP04085 RNU6-596P-201ENST00000365395 98 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 Y_RNA.485-201ENST00000384395 102 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 RNU6-790P-201ENST00000384479 105 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 AL645733.1-201ENST00000402250 217 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 U3.35-201ENST00000408405 208 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.16□□□□□ -1.58
PDGFAP04085 OR6D1P-201ENST00000436165 939 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 AL359073.1-201ENST00000448036 403 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.16□□□□□ -1.58
PDGFAP04085 AP000942.1-201ENST00000463969 747 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 RPL17P19-201ENST00000489069 552 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFAP04085 RPS4XP20-201ENST00000505751 772 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 RNU4-60P-201ENST00000517239 135 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFAP04085 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
PDGFAP04085 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.16□□□□□ -1.58
PDGFAP04085 Z98751.3-201ENST00000604447 521 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 AC020634.1-201ENST00000608701 549 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 AC126915.2-201ENST00000610957 190 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.16□□□□□ -1.58
PDGFAP04085 AC090607.5-201ENST00000615692 224 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 U2.1-201ENST00000618978 145 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.16□□□□□ -1.58
PDGFAP04085 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.16□□□□□ -1.58
PDGFAP04085 AL592437.2-201ENST00000421655 2434 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFAP04085 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.16□□□□□ -1.58
PDGFAP04085 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
PDGFAP04085 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDGFAP04085 AC009812.4-201ENST00000569134 1805 ntBASIC5.16□□□□□ -1.58
PDGFAP04085 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
PDGFAP04085 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PDGFAP04085 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
PDGFAP04085 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.15□□□□□ -1.58
PDGFAP04085 SNORA56-201ENST00000383966 129 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 MIR130A-201ENST00000385274 89 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 SNORD73A-201ENST00000386062 65 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 AL030996.1-201ENST00000411430 235 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 AL513331.1-201ENST00000411908 397 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 AL353621.1-201ENST00000418219 243 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 UBE2D3P2-201ENST00000424409 445 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 OR2AH1P-201ENST00000425717 928 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 AL451062.2-201ENST00000427515 271 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 AC093414.1-201ENST00000434712 514 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.15□□□□□ -1.59
PDGFAP04085 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.15□□□□□ -1.59
PDGFAP04085 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.15□□□□□ -1.59
PDGFAP04085 RPL23AP31-201ENST00000456160 467 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 RPL23AP2-201ENST00000471227 466 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.15□□□□□ -1.59
PDGFAP04085 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.15□□□□□ -1.59
PDGFAP04085 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.15□□□□□ -1.59
PDGFAP04085 APOOP4-201ENST00000513530 597 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 Y_RNA.668-201ENST00000516233 93 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 RNU6-143P-201ENST00000516942 93 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.15□□□□□ -1.59
PDGFAP04085 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.15□□□□□ -1.59
PDGFAP04085 HIGD1AP5-201ENST00000529959 259 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.15□□□□□ -1.59
PDGFAP04085 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.15□□□□□ -1.59
PDGFAP04085 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.15□□□□□ -1.59
PDGFAP04085 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.15□□□□□ -1.59
PDGFAP04085 AC016727.2-201ENST00000603988 621 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 AC107294.1-201ENST00000609524 467 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 AL021879.1-201ENST00000611756 288 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.15□□□□□ -1.59
PDGFAP04085 AL512643.1-201ENST00000635735 524 ntBASIC5.15□□□□□ -1.59
PDGFAP04085 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PDGFAP04085 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFAP04085 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFAP04085 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
PDGFAP04085 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDGFAP04085 MAPK10-304ENST00000641341 3984 ntBASIC5.14□□□□□ -1.59
PDGFAP04085 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
PDGFAP04085 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PDGFAP04085 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PDGFAP04085 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PDGFAP04085 SDAD1P2-201ENST00000441308 2028 ntBASIC5.14□□□□□ -1.59
PDGFAP04085 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.14□□□□□ -1.59
PDGFAP04085 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PDGFAP04085 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.14□□□□□ -1.59
PDGFAP04085 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDGFAP04085 Y_RNA.577-201ENST00000384794 101 ntBASIC5.14□□□□□ -1.59
PDGFAP04085 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.14□□□□□ -1.59
PDGFAP04085 PTMAP3-201ENST00000447474 330 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms