Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.05□□□□□ -2.08
COL4A1P02462 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.05□□□□□ -2.08
COL4A1P02462 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL4A1P02462 SETP8-201ENST00000435341 628 ntBASIC2.05□□□□□ -2.08
COL4A1P02462 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A1P02462 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.05□□□□□ -2.08
COL4A1P02462 BX322784.1-201ENST00000455793 1077 ntBASIC2.05□□□□□ -2.08
COL4A1P02462 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.05□□□□□ -2.08
COL4A1P02462 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.05□□□□□ -2.08
COL4A1P02462 MLLT10P2-201ENST00000506434 249 ntBASIC2.05□□□□□ -2.08
COL4A1P02462 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A1P02462 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A1P02462 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.05□□□□□ -2.08
COL4A1P02462 AC074029.2-201ENST00000551045 634 ntBASIC2.05□□□□□ -2.08
COL4A1P02462 AC126177.3-201ENST00000551839 688 ntBASIC2.05□□□□□ -2.08
COL4A1P02462 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A1P02462 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.05□□□□□ -2.08
COL4A1P02462 AC034268.2-201ENST00000571784 482 ntBASIC2.05□□□□□ -2.08
COL4A1P02462 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.05□□□□□ -2.08
COL4A1P02462 AC020895.1-201ENST00000595362 272 ntBASIC2.05□□□□□ -2.08
COL4A1P02462 AC079791.1-201ENST00000605356 973 ntBASIC2.05□□□□□ -2.08
COL4A1P02462 AC073111.2-201ENST00000605657 1075 ntBASIC2.05□□□□□ -2.08
COL4A1P02462 HMGN2P28-201ENST00000606102 262 ntBASIC2.05□□□□□ -2.08
COL4A1P02462 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL4A1P02462 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.04□□□□□ -2.08
COL4A1P02462 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL4A1P02462 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL4A1P02462 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.04□□□□□ -2.08
COL4A1P02462 AC234782.4-201ENST00000417646 1048 ntBASIC2.04□□□□□ -2.08
COL4A1P02462 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.04□□□□□ -2.08
COL4A1P02462 ARL5AP3-201ENST00000439327 386 ntBASIC2.04□□□□□ -2.08
COL4A1P02462 MTND3P4-201ENST00000453537 303 ntBASIC2.04□□□□□ -2.08
COL4A1P02462 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.04□□□□□ -2.08
COL4A1P02462 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.04□□□□□ -2.08
COL4A1P02462 AC010683.1-201ENST00000473673 378 ntBASIC2.04□□□□□ -2.08
COL4A1P02462 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.04□□□□□ -2.08
COL4A1P02462 RNU1-40P-201ENST00000516816 164 ntBASIC2.04□□□□□ -2.08
COL4A1P02462 RNU1-97P-201ENST00000516872 164 ntBASIC2.04□□□□□ -2.08
COL4A1P02462 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.04□□□□□ -2.08
COL4A1P02462 AC104986.1-201ENST00000517978 436 ntBASIC2.04□□□□□ -2.08
COL4A1P02462 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
COL4A1P02462 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.04□□□□□ -2.08
COL4A1P02462 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.04□□□□□ -2.08
COL4A1P02462 AL035411.2-201ENST00000604022 421 ntBASIC2.04□□□□□ -2.08
COL4A1P02462 AL118508.4-201ENST00000624142 1176 ntBASIC2.04□□□□□ -2.08
COL4A1P02462 AP001486.2-201ENST00000561652 5113 ntBASIC2.04□□□□□ -2.08
COL4A1P02462 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.04□□□□□ -2.08
COL4A1P02462 AL109809.4-201ENST00000603520 2185 ntBASIC2.04□□□□□ -2.08
COL4A1P02462 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL4A1P02462 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL4A1P02462 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.03□□□□□ -2.08
COL4A1P02462 MIR337-201ENST00000362281 93 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 RNA5SP37-201ENST00000365420 130 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 AC092638.1-201ENST00000411966 1275 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 RPL26P37-201ENST00000411983 438 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 RPS7P9-201ENST00000414704 586 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 MTND1P23-201ENST00000416931 372 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 RPS3AP9-201ENST00000417027 792 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 USP9YP27-201ENST00000418455 438 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 AMD1P1-201ENST00000457220 922 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 RPS29P20-201ENST00000489592 171 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.03□□□□□ -2.08
COL4A1P02462 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.03□□□□□ -2.08
COL4A1P02462 SNORA31.26-201ENST00000517250 137 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 AP003385.6-201ENST00000531603 374 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 MIR548Y-201ENST00000582739 110 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.03□□□□□ -2.08
COL4A1P02462 BX322635.1-201ENST00000605804 496 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.03□□□□□ -2.08
COL4A1P02462 AC012150.2-201ENST00000621300 544 ntBASIC2.03□□□□□ -2.08
COL4A1P02462 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
COL4A1P02462 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
COL4A1P02462 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
COL4A1P02462 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL4A1P02462 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
COL4A1P02462 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
COL4A1P02462 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
COL4A1P02462 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL4A1P02462 MIR92A2-201ENST00000385299 75 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 AL589655.1-201ENST00000405398 482 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 AP000275.1-201ENST00000411943 390 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.02□□□□□ -2.09
COL4A1P02462 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A1P02462 AC093392.2-201ENST00000450682 337 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A1P02462 AC117532.1-201ENST00000514638 323 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A1P02462 AC104997.1-201ENST00000519761 717 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.02□□□□□ -2.09
COL4A1P02462 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A1P02462 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A1P02462 MTCO2P22-201ENST00000603246 681 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 AC011472.4-201ENST00000615848 491 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.02□□□□□ -2.09
COL4A1P02462 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.02□□□□□ -2.09
COL4A1P02462 MIR7-1-201ENST00000384871 110 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.02□□□□□ -2.09
COL4A1P02462 AC244453.4-201ENST00000419150 388 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 MTCO1P43-201ENST00000431831 488 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms