Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RPS4XP10-201ENST00000465034 731 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AC084198.1-201ENST00000477747 402 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AC109486.1-201ENST00000486833 374 ntBASIC3.6□□□□□ -1.83
LDLRP01130 HMGB1P36-201ENST00000487709 576 ntBASIC3.6□□□□□ -1.83
LDLRP01130 RPL7P47-201ENST00000497299 556 ntBASIC3.6□□□□□ -1.83
LDLRP01130 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.6□□□□□ -1.83
LDLRP01130 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LDLRP01130 AC024589.1-201ENST00000512207 263 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AC008549.1-201ENST00000512900 643 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AC034159.1-201ENST00000513885 583 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AC106038.2-201ENST00000520706 568 ntBASIC3.6□□□□□ -1.83
LDLRP01130 COX6CP8-201ENST00000522620 226 ntBASIC3.6□□□□□ -1.83
LDLRP01130 OR4R3P-201ENST00000525084 838 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.6□□□□□ -1.83
LDLRP01130 AC013828.2-201ENST00000532487 235 ntBASIC3.6□□□□□ -1.83
LDLRP01130 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.6□□□□□ -1.83
LDLRP01130 AC091516.1-201ENST00000549191 703 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.6□□□□□ -1.83
LDLRP01130 GTF2IP22-201ENST00000554443 182 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AP005205.1-201ENST00000563503 508 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AC087481.2-201ENST00000565492 330 ntBASIC3.6□□□□□ -1.83
LDLRP01130 MIR4738-201ENST00000579134 87 ntBASIC3.6□□□□□ -1.83
LDLRP01130 MTND1P15-201ENST00000579262 949 ntBASIC3.6□□□□□ -1.83
LDLRP01130 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.6□□□□□ -1.83
LDLRP01130 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.6□□□□□ -1.83
LDLRP01130 U73023.1-201ENST00000603134 700 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AC128687.1-201ENST00000605304 619 ntBASIC3.6□□□□□ -1.83
LDLRP01130 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.6□□□□□ -1.83
LDLRP01130 U3.45-201ENST00000607547 219 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AC097468.3-201ENST00000607956 456 ntBASIC3.6□□□□□ -1.83
LDLRP01130 MIR6868-201ENST00000611215 58 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AC138749.5-201ENST00000611461 208 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AL592295.2-201ENST00000612578 206 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AC010678.1-201ENST00000614118 713 ntBASIC3.6□□□□□ -1.83
LDLRP01130 AC013476.2-201ENST00000614456 459 ntBASIC3.6□□□□□ -1.83
LDLRP01130 U6.42-201ENST00000618440 107 ntBASIC3.6□□□□□ -1.83
LDLRP01130 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LDLRP01130 U6.98-201ENST00000637157 84 ntBASIC3.6□□□□□ -1.83
LDLRP01130 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.6□□□□□ -1.83
LDLRP01130 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.6□□□□□ -1.83
LDLRP01130 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LDLRP01130 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.6□□□□□ -1.83
LDLRP01130 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LDLRP01130 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDLRP01130 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LDLRP01130 PWAR6-201ENST00000552334 4618 ntBASIC3.59□□□□□ -1.83
LDLRP01130 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDLRP01130 RNU6-283P-201ENST00000364788 107 ntBASIC3.59□□□□□ -1.83
LDLRP01130 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDLRP01130 SNORA75-201ENST00000384158 137 ntBASIC3.59□□□□□ -1.83
LDLRP01130 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LDLRP01130 RNU6-821P-201ENST00000390995 107 ntBASIC3.59□□□□□ -1.83
LDLRP01130 RPS29P4-201ENST00000414733 161 ntBASIC3.59□□□□□ -1.83
LDLRP01130 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.59□□□□□ -1.83
LDLRP01130 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.59□□□□□ -1.83
LDLRP01130 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.59□□□□□ -1.83
LDLRP01130 LARP1BP3-201ENST00000437229 869 ntBASIC3.59□□□□□ -1.83
LDLRP01130 SDCBPP1-201ENST00000440192 890 ntBASIC3.59□□□□□ -1.83
LDLRP01130 CYCSP32-201ENST00000440548 321 ntBASIC3.59□□□□□ -1.83
LDLRP01130 MTND1P30-201ENST00000441241 901 ntBASIC3.59□□□□□ -1.83
LDLRP01130 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.59□□□□□ -1.83
LDLRP01130 RPL7P52-201ENST00000449200 742 ntBASIC3.59□□□□□ -1.83
LDLRP01130 RPL36AP33-201ENST00000450395 310 ntBASIC3.59□□□□□ -1.83
LDLRP01130 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.59□□□□□ -1.83
LDLRP01130 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.59□□□□□ -1.83
LDLRP01130 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.59□□□□□ -1.83
LDLRP01130 AL358832.1-201ENST00000497800 389 ntBASIC3.59□□□□□ -1.83
LDLRP01130 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LDLRP01130 AC096751.1-202ENST00000502691 1067 ntBASIC3.59□□□□□ -1.83
LDLRP01130 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.59□□□□□ -1.83
LDLRP01130 RPL37P25-201ENST00000507308 276 ntBASIC3.59□□□□□ -1.83
LDLRP01130 AC006390.1-201ENST00000508068 283 ntBASIC3.59□□□□□ -1.83
LDLRP01130 AC093809.1-201ENST00000509155 340 ntBASIC3.59□□□□□ -1.83
LDLRP01130 CDC42P4-201ENST00000510507 563 ntBASIC3.59□□□□□ -1.83
LDLRP01130 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.59□□□□□ -1.83
LDLRP01130 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LDLRP01130 RNU6-1178P-201ENST00000516674 107 ntBASIC3.59□□□□□ -1.83
LDLRP01130 RNU6-1231P-201ENST00000517185 103 ntBASIC3.59□□□□□ -1.83
LDLRP01130 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.59□□□□□ -1.83
LDLRP01130 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.59□□□□□ -1.83
LDLRP01130 AC016957.1-201ENST00000534895 309 ntBASIC3.59□□□□□ -1.83
LDLRP01130 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.59□□□□□ -1.83
LDLRP01130 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.59□□□□□ -1.83
LDLRP01130 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.59□□□□□ -1.83
LDLRP01130 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.59□□□□□ -1.83
LDLRP01130 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.59□□□□□ -1.83
LDLRP01130 IGHV3-29-201ENST00000604817 344 ntBASIC3.59□□□□□ -1.83
LDLRP01130 AC005000.2-201ENST00000605468 310 ntBASIC3.59□□□□□ -1.83
LDLRP01130 AL031775.1-201ENST00000607014 887 ntBASIC3.59□□□□□ -1.83
LDLRP01130 AL357080.1-201ENST00000617394 239 ntBASIC3.59□□□□□ -1.83
LDLRP01130 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDLRP01130 AL445264.1-201ENST00000621719 171 ntBASIC3.59□□□□□ -1.83
LDLRP01130 AC019226.1-201ENST00000625666 515 ntBASIC3.59□□□□□ -1.83
LDLRP01130 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.59□□□□□ -1.83
LDLRP01130 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.59□□□□□ -1.83
LDLRP01130 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.59□□□□□ -1.83
LDLRP01130 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDLRP01130 AC090337.1-201ENST00000579651 2074 ntBASIC3.59□□□□□ -1.83
LDLRP01130 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.59□□□□□ -1.83
LDLRP01130 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms