Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
DDX58O95786 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
DDX58O95786 AL513185.3-201ENST00000433335 1300 ntBASIC3.99□□□□□ -1.77
DDX58O95786 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
DDX58O95786 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
DDX58O95786 RNU6-1207P-201ENST00000384343 107 ntBASIC3.99□□□□□ -1.77
DDX58O95786 SNORD15B-201ENST00000384714 146 ntBASIC3.99□□□□□ -1.77
DDX58O95786 MIR135A2-201ENST00000384854 100 ntBASIC3.99□□□□□ -1.77
DDX58O95786 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
DDX58O95786 AL590084.2-201ENST00000401481 382 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AL138885.1-201ENST00000405921 675 ntBASIC3.99□□□□□ -1.77
DDX58O95786 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.99□□□□□ -1.77
DDX58O95786 RHEBP3-201ENST00000411920 351 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AC009237.5-201ENST00000414271 501 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AC098592.1-201ENST00000419352 333 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AL159169.1-201ENST00000421119 127 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX58O95786 AL035407.1-201ENST00000429211 571 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX58O95786 THAP5P1-201ENST00000439089 262 ntBASIC3.99□□□□□ -1.77
DDX58O95786 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.99□□□□□ -1.77
DDX58O95786 OR6K5P-201ENST00000447050 945 ntBASIC3.99□□□□□ -1.77
DDX58O95786 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.99□□□□□ -1.77
DDX58O95786 HMGN1P18-201ENST00000457642 277 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AC010401.1-201ENST00000463867 348 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AC078785.3-201ENST00000476607 425 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AC004263.1-201ENST00000479327 332 ntBASIC3.99□□□□□ -1.77
DDX58O95786 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX58O95786 AP001025.2-201ENST00000490908 477 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX58O95786 RNU6-714P-201ENST00000516963 103 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX58O95786 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX58O95786 PSMA2P1-201ENST00000526365 646 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
DDX58O95786 AP002404.1-201ENST00000532005 451 ntBASIC3.99□□□□□ -1.77
DDX58O95786 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
DDX58O95786 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.99□□□□□ -1.77
DDX58O95786 AL391156.1-201ENST00000554965 554 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AC013444.2-201ENST00000603317 787 ntBASIC3.99□□□□□ -1.77
DDX58O95786 PRELID3BP8-201ENST00000604148 295 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AC012443.1-201ENST00000605605 231 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AC100793.4-201ENST00000613683 429 ntBASIC3.99□□□□□ -1.77
DDX58O95786 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.99□□□□□ -1.77
DDX58O95786 AC008147.4-201ENST00000617570 1204 ntBASIC3.99□□□□□ -1.77
DDX58O95786 AL356596.1-201ENST00000624230 379 ntBASIC3.99□□□□□ -1.77
DDX58O95786 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.99□□□□□ -1.77
DDX58O95786 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
DDX58O95786 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.99□□□□□ -1.77
DDX58O95786 AP000526.1-201ENST00000603308 1388 ntBASIC3.99□□□□□ -1.77
DDX58O95786 RPS4XP5-202ENST00000449995 1334 ntBASIC3.98□□□□□ -1.77
DDX58O95786 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.98□□□□□ -1.77
DDX58O95786 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
DDX58O95786 AL021368.2-201ENST00000606125 5352 ntBASIC3.98□□□□□ -1.77
DDX58O95786 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.98□□□□□ -1.77
DDX58O95786 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.98□□□□□ -1.77
DDX58O95786 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
DDX58O95786 GNG5P1-201ENST00000255500 204 ntBASIC3.98□□□□□ -1.77
DDX58O95786 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
DDX58O95786 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
DDX58O95786 AP002088.1-201ENST00000382740 395 ntBASIC3.98□□□□□ -1.77
DDX58O95786 NDUFB4P4-201ENST00000404822 243 ntBASIC3.98□□□□□ -1.77
DDX58O95786 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.98□□□□□ -1.77
DDX58O95786 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.98□□□□□ -1.77
DDX58O95786 AC108734.1-201ENST00000439549 399 ntBASIC3.98□□□□□ -1.77
DDX58O95786 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.98□□□□□ -1.77
DDX58O95786 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.98□□□□□ -1.77
DDX58O95786 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
DDX58O95786 AC017037.2-201ENST00000513850 890 ntBASIC3.98□□□□□ -1.77
DDX58O95786 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.98□□□□□ -1.77
DDX58O95786 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
DDX58O95786 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.98□□□□□ -1.77
DDX58O95786 AC011602.1-201ENST00000546484 331 ntBASIC3.98□□□□□ -1.77
DDX58O95786 AL353997.4-201ENST00000586196 166 ntBASIC3.98□□□□□ -1.77
DDX58O95786 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.98□□□□□ -1.77
DDX58O95786 AF131215.7-201ENST00000602443 707 ntBASIC3.98□□□□□ -1.77
DDX58O95786 AL353778.1-201ENST00000603149 408 ntBASIC3.98□□□□□ -1.77
DDX58O95786 AP002826.1-201ENST00000608835 315 ntBASIC3.98□□□□□ -1.77
DDX58O95786 AL450489.1-201ENST00000612071 468 ntBASIC3.98□□□□□ -1.77
DDX58O95786 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.98□□□□□ -1.77
DDX58O95786 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
DDX58O95786 AC079416.3-201ENST00000624479 549 ntBASIC3.98□□□□□ -1.77
DDX58O95786 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.98□□□□□ -1.77
DDX58O95786 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.98□□□□□ -1.77
DDX58O95786 AP001148.1-201ENST00000624124 2359 ntBASIC3.98□□□□□ -1.77
DDX58O95786 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
DDX58O95786 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
DDX58O95786 AC011477.1-204ENST00000623416 1325 ntBASIC3.97□□□□□ -1.77
DDX58O95786 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
DDX58O95786 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
DDX58O95786 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
DDX58O95786 TAB3P1-202ENST00000452645 1634 ntBASIC3.97□□□□□ -1.77
DDX58O95786 MIR423-201ENST00000362201 94 ntBASIC3.97□□□□□ -1.77
DDX58O95786 RNA5SP295-201ENST00000362655 121 ntBASIC3.97□□□□□ -1.77
DDX58O95786 RNU6-343P-201ENST00000364709 104 ntBASIC3.97□□□□□ -1.77
DDX58O95786 MIR184-201ENST00000384962 84 ntBASIC3.97□□□□□ -1.77
DDX58O95786 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
DDX58O95786 AF228730.1-201ENST00000397972 663 ntBASIC3.97□□□□□ -1.77
DDX58O95786 RAP1BP1-201ENST00000412709 553 ntBASIC3.97□□□□□ -1.77
DDX58O95786 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms