Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.71□□□□□ -1.98
CTDNEP1O95476 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.71□□□□□ -1.98
CTDNEP1O95476 MTCYBP32-201ENST00000427945 1084 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 AC109583.1-201ENST00000432156 268 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.71□□□□□ -1.98
CTDNEP1O95476 SNRPEP4-201ENST00000435815 279 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.71□□□□□ -1.98
CTDNEP1O95476 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CTDNEP1O95476 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.71□□□□□ -1.98
CTDNEP1O95476 MRPL42P4-201ENST00000453267 443 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.71□□□□□ -1.98
CTDNEP1O95476 snoU13.4-201ENST00000458916 104 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 AC010301.1-201ENST00000473936 355 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 AC096571.1-202ENST00000506634 735 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 AC008837.1-201ENST00000511513 412 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.71□□□□□ -1.98
CTDNEP1O95476 RNU6-276P-201ENST00000516114 96 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 AC091163.3-201ENST00000518269 1144 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.71□□□□□ -1.98
CTDNEP1O95476 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.71□□□□□ -1.98
CTDNEP1O95476 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CTDNEP1O95476 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.71□□□□□ -1.98
CTDNEP1O95476 MIR4672-201ENST00000583126 81 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 AP001029.3-201ENST00000588063 596 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 DUXAP4-201ENST00000603046 613 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 HSPE1P14-201ENST00000605812 302 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 AL583856.2-201ENST00000606298 543 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 AC024060.1-201ENST00000607052 494 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CTDNEP1O95476 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CTDNEP1O95476 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.71□□□□□ -1.98
CTDNEP1O95476 AL445984.1-201ENST00000637834 659 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
CTDNEP1O95476 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CTDNEP1O95476 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.7□□□□□ -1.98
CTDNEP1O95476 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.7□□□□□ -1.98
CTDNEP1O95476 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CTDNEP1O95476 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
CTDNEP1O95476 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CTDNEP1O95476 MTCO2P31-201ENST00000402702 684 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 RAP1BP1-201ENST00000412709 553 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.7□□□□□ -1.98
CTDNEP1O95476 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.7□□□□□ -1.98
CTDNEP1O95476 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CTDNEP1O95476 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC113420.1-201ENST00000507903 571 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC004062.1-201ENST00000509926 645 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC104057.1-201ENST00000515547 497 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 RNU6-488P-201ENST00000515918 99 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 RNU6-885P-201ENST00000516607 104 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC023632.1-201ENST00000518463 375 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC025881.1-201ENST00000518851 512 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.7□□□□□ -1.98
CTDNEP1O95476 MTCO3P15-201ENST00000526563 574 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.7□□□□□ -1.98
CTDNEP1O95476 AP000790.1-201ENST00000528891 737 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC021269.2-201ENST00000532318 330 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC044913.1-201ENST00000557200 430 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 AL669831.4-202ENST00000590817 238 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC079089.3-201ENST00000603094 673 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC006023.1-201ENST00000603944 259 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC008962.1-201ENST00000605729 304 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC104237.2-201ENST00000612456 443 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 AC013437.2-201ENST00000639587 677 ntBASIC2.7□□□□□ -1.98
CTDNEP1O95476 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CTDNEP1O95476 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CTDNEP1O95476 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 AC097714.1-201ENST00000511272 1647 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CTDNEP1O95476 RNU6-582P-201ENST00000362989 107 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 RNU6-263P-201ENST00000363811 107 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 RNU6-707P-201ENST00000364647 95 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.69□□□□□ -1.98
CTDNEP1O95476 Y_RNA.493-201ENST00000384422 102 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 SNORD116-23-201ENST00000384645 92 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 MIR217-201ENST00000384817 110 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 MTCO1P56-201ENST00000401674 224 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 MTCO3P12-201ENST00000416718 547 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 RPS3AP9-201ENST00000417027 792 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CTDNEP1O95476 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.69□□□□□ -1.98
CTDNEP1O95476 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.69□□□□□ -1.98
CTDNEP1O95476 MTATP6P4-201ENST00000427725 675 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.69□□□□□ -1.98
CTDNEP1O95476 MTCYBP42-201ENST00000444653 1130 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 AC104164.3-201ENST00000467363 1258 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.69□□□□□ -1.98
CTDNEP1O95476 GAPDHP39-201ENST00000481866 979 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.69□□□□□ -1.98
CTDNEP1O95476 RN7SL636P-201ENST00000497504 294 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 MTCYBP37-201ENST00000510642 1133 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 RNU1-103P-201ENST00000516502 125 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 AC010376.1-201ENST00000522101 334 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms