Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-2O95096 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-2O95096 AC138915.3-201ENST00000562908 1389 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
NKX2-2O95096 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX2-2O95096 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-2O95096 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NKX2-2O95096 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NKX2-2O95096 GNG5P1-201ENST00000255500 204 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 RNU1-18P-201ENST00000363062 164 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 RNU4-1-201ENST00000363925 141 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 Y_RNA.194-201ENST00000363985 102 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-2O95096 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NKX2-2O95096 MIR30B-201ENST00000384850 88 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 RNA5SP424-201ENST00000390988 115 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 AC007899.1-201ENST00000412776 775 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 UBE2FP1-201ENST00000416536 447 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX2-2O95096 AL589872.1-201ENST00000426602 288 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-2O95096 AL591419.1-201ENST00000427423 339 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.48□□□□□ -1.85
NKX2-2O95096 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NKX2-2O95096 RPL9P32-201ENST00000464118 620 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 HSPE1P6-201ENST00000479457 291 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NKX2-2O95096 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NKX2-2O95096 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.48□□□□□ -1.85
NKX2-2O95096 MTCO3P7-201ENST00000510008 774 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.48□□□□□ -1.85
NKX2-2O95096 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.48□□□□□ -1.85
NKX2-2O95096 AC100870.1-201ENST00000522035 505 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX2-2O95096 AL391156.1-201ENST00000554965 554 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX2-2O95096 AC087499.8-201ENST00000578406 226 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 MIR3682-201ENST00000581338 84 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.48□□□□□ -1.85
NKX2-2O95096 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.48□□□□□ -1.85
NKX2-2O95096 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NKX2-2O95096 AC005344.1-201ENST00000613391 459 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 uc_338.32-201ENST00000615087 172 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 RMST_9.1-201ENST00000619945 193 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 AC068831.8-201ENST00000620171 435 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.48□□□□□ -1.85
NKX2-2O95096 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
NKX2-2O95096 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.48□□□□□ -1.85
NKX2-2O95096 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.48□□□□□ -1.85
NKX2-2O95096 MAPK10-372ENST00000641954 3413 ntBASIC3.48□□□□□ -1.85
NKX2-2O95096 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
NKX2-2O95096 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX2-2O95096 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NKX2-2O95096 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NKX2-2O95096 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NKX2-2O95096 RNU6-623P-201ENST00000363143 105 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 U8.3-201ENST00000363321 132 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 RNY4P16-201ENST00000364768 94 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
NKX2-2O95096 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NKX2-2O95096 RNU6-278P-201ENST00000390945 109 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 SOD2P1-201ENST00000396543 562 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 AC110754.1-201ENST00000399740 601 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 DEFB108C-201ENST00000400154 252 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 MRPL42P2-201ENST00000403169 426 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.47□□□□□ -1.85
NKX2-2O95096 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX2-2O95096 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX2-2O95096 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX2-2O95096 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX2-2O95096 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.47□□□□□ -1.85
NKX2-2O95096 AC009961.2-201ENST00000435771 251 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 AC244505.5-201ENST00000443639 207 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 CFTRP1-201ENST00000456646 183 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX2-2O95096 MTCO2P29-201ENST00000465212 189 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 RN7SL132P-201ENST00000478131 296 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 MTND1P3-201ENST00000484956 952 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 AC020593.1-201ENST00000507399 299 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 RNU2-46P-201ENST00000517038 113 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 RNU6-64P-201ENST00000517119 105 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX2-2O95096 AC090281.1-201ENST00000523019 276 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX2-2O95096 CBX3P5-201ENST00000552017 521 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.47□□□□□ -1.85
NKX2-2O95096 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.47□□□□□ -1.85
NKX2-2O95096 AC103987.3-201ENST00000582071 292 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 MIR4293-201ENST00000584305 78 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 AC068790.5-201ENST00000602741 355 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 AC015871.2-201ENST00000603605 948 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 AC090578.1-201ENST00000604955 591 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.47□□□□□ -1.85
NKX2-2O95096 PISRT1-201ENST00000626175 531 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 FARSBP1-201ENST00000435808 1778 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX2-2O95096 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.47□□□□□ -1.85
NKX2-2O95096 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms