Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 TAAR7P-201ENST00000436141 242 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK1BO75841 AC009237.8-201ENST00000445492 379 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
UPK1BO75841 CYCSP35-201ENST00000451978 304 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 TRGVB-201ENST00000453257 471 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.28□□□□□ -2.04
UPK1BO75841 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK1BO75841 AC092902.1-201ENST00000486999 259 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK1BO75841 MTCYBP17-201ENST00000503579 789 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 HMGN1P15-201ENST00000513870 295 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.28□□□□□ -2.04
UPK1BO75841 RNU1-95P-201ENST00000516357 160 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 SNORA74D-201ENST00000516404 141 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 RNU1-128P-201ENST00000516704 160 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 AC087808.1-201ENST00000520501 361 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 AC103783.1-201ENST00000520506 373 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
UPK1BO75841 AC007224.1-201ENST00000564410 144 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.28□□□□□ -2.04
UPK1BO75841 AP001429.1-201ENST00000602568 530 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 AC004067.1-201ENST00000608733 700 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 AL355365.1-201ENST00000616480 294 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 AC109454.4-201ENST00000623411 649 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 AC068880.5-201ENST00000624331 290 ntBASIC2.28□□□□□ -2.04
UPK1BO75841 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.28□□□□□ -2.04
UPK1BO75841 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.28□□□□□ -2.04
UPK1BO75841 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
UPK1BO75841 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
UPK1BO75841 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
UPK1BO75841 Y_RNA.408-201ENST00000383987 102 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 SNORA5A-201ENST00000384111 134 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 AL356057.2-201ENST00000403318 432 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 AL162578.1-201ENST00000406202 378 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 MIR1290-201ENST00000408735 78 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 RNU4-47P-201ENST00000410876 114 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.27□□□□□ -2.05
UPK1BO75841 RPL7L1P10-201ENST00000427790 463 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 C4BPAP2-201ENST00000428434 478 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.27□□□□□ -2.05
UPK1BO75841 AC005019.1-201ENST00000436455 431 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.27□□□□□ -2.05
UPK1BO75841 DDX3P2-201ENST00000446138 111 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
UPK1BO75841 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.27□□□□□ -2.05
UPK1BO75841 RNU6-420P-201ENST00000458780 107 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 RPL27AP5-201ENST00000469428 449 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.27□□□□□ -2.05
UPK1BO75841 CEACAMP10-202ENST00000495431 496 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.27□□□□□ -2.05
UPK1BO75841 SNORA26.10-201ENST00000516427 141 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 RNU6-1256P-201ENST00000516539 103 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 DEFB130C-202ENST00000530001 230 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.27□□□□□ -2.05
UPK1BO75841 AMZ2P1-203ENST00000565833 850 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.27□□□□□ -2.05
UPK1BO75841 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.27□□□□□ -2.05
UPK1BO75841 AL390208.1-201ENST00000605885 644 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.27□□□□□ -2.05
UPK1BO75841 AC080013.4-201ENST00000607624 649 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.27□□□□□ -2.05
UPK1BO75841 AC243773.3-201ENST00000613270 256 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 AL596245.1-201ENST00000618994 362 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 AC073308.1-201ENST00000623696 305 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 AC099654.7-201ENST00000635788 2127 ntBASIC2.27□□□□□ -2.05
UPK1BO75841 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.27□□□□□ -2.05
UPK1BO75841 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
UPK1BO75841 ZNF285B-201ENST00000561698 1767 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
UPK1BO75841 RPL21P132-201ENST00000331267 462 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 ANKRD36P1-201ENST00000344424 659 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
UPK1BO75841 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
UPK1BO75841 MIR514A1-201ENST00000385133 98 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 Y_RNA.578-201ENST00000390903 88 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 SNORA48.5-201ENST00000391143 135 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.26□□□□□ -2.05
UPK1BO75841 MTND1P23-201ENST00000416931 372 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 CCDC58P2-201ENST00000417131 366 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.26□□□□□ -2.05
UPK1BO75841 AC018630.2-202ENST00000422992 927 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 RPL7P44-201ENST00000424827 742 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 RPL7P2-201ENST00000427639 268 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 OR4K11P-201ENST00000431829 904 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 AL512844.2-201ENST00000433990 593 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 HSPD1P21-201ENST00000436541 245 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 GTF2IP7-202ENST00000436677 309 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 SDCBPP1-201ENST00000440192 890 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 Z75741.1-201ENST00000446793 314 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 AL031659.1-201ENST00000447075 539 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.26□□□□□ -2.05
UPK1BO75841 CAB39P1-201ENST00000502277 460 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.26□□□□□ -2.05
UPK1BO75841 HMGB1P28-201ENST00000507778 552 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 RN7SKP31-201ENST00000516354 278 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 IGLV3-17-201ENST00000519099 244 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.26□□□□□ -2.05
UPK1BO75841 HSPA8P13-201ENST00000523715 472 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms