Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM13O60858 Y_RNA.22-201ENST00000362492 102 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TRIM13O60858 MIR223-201ENST00000385204 110 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM13O60858 HDGFP1-201ENST00000405943 252 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM13O60858 OR6C66P-201ENST00000414917 930 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 ATG3P1-201ENST00000419507 911 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM13O60858 RPL36P19-201ENST00000430744 301 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 AC093414.1-201ENST00000434712 514 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 CEACAMP9-201ENST00000442990 513 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 MTCO3P45-201ENST00000443036 613 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 EEF1A1P1-201ENST00000447052 739 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 PTMAP3-201ENST00000447474 330 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM13O60858 RPS29P15-201ENST00000458329 171 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 RPS18P6-201ENST00000476880 458 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 NIP7P2-201ENST00000485801 544 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 Y_RNA.654-201ENST00000497848 106 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 AC104109.1-201ENST00000498563 436 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 AC116655.1-201ENST00000508324 901 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 RNU6-256P-201ENST00000516747 97 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 AC023157.2-201ENST00000540596 141 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM13O60858 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM13O60858 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM13O60858 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM13O60858 AL121992.2-201ENST00000606262 256 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 AC091979.2-201ENST00000607514 214 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 AC011890.2-201ENST00000613393 294 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 AL158163.1-201ENST00000603915 1649 ntBASIC4.63□□□□□ -1.67
TRIM13O60858 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM13O60858 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM13O60858 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM13O60858 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM13O60858 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM13O60858 AC000123.3-201ENST00000624029 4975 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM13O60858 AC005592.1-201ENST00000566527 1640 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TRIM13O60858 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM13O60858 RNU6-39P-201ENST00000384344 107 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 U3.25-201ENST00000391209 220 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 AL360182.1-201ENST00000397433 468 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 AL031679.1-201ENST00000400616 525 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 RNU2-29P-201ENST00000410423 189 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 RNU6-603P-201ENST00000411403 107 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 AC092832.1-201ENST00000422934 400 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM13O60858 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM13O60858 RPL23AP74-201ENST00000437246 471 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.62□□□□□ -1.67
TRIM13O60858 TRBV26-201ENST00000456572 344 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 SETP20-201ENST00000457046 852 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 RPL23AP41-201ENST00000484754 458 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 RPL7P51-201ENST00000490532 749 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 AC090453.1-201ENST00000495560 436 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM13O60858 AC140172.1-201ENST00000502928 141 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM13O60858 AC004980.4-201ENST00000513375 203 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 RNA5SP446-201ENST00000515955 82 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 RNU1-6P-201ENST00000516290 144 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.62□□□□□ -1.67
TRIM13O60858 AP000763.2-201ENST00000540641 163 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 GNAI2P1-201ENST00000541815 315 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 AC133555.2-201ENST00000550213 292 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM13O60858 AC023043.2-201ENST00000589678 1026 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 RPL7P50-201ENST00000600588 727 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 AC020910.3-201ENST00000603701 874 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM13O60858 MIR8062-201ENST00000621515 85 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 AC243312.2-201ENST00000623340 601 ntBASIC4.62□□□□□ -1.67
TRIM13O60858 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM13O60858 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM13O60858 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM13O60858 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM13O60858 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM13O60858 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
TRIM13O60858 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM13O60858 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM13O60858 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM13O60858 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM13O60858 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM13O60858 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM13O60858 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM13O60858 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM13O60858 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
TRIM13O60858 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM13O60858 RNU6-593P-201ENST00000364716 112 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 Y_RNA.288-201ENST00000364854 92 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 Y_RNA.389-201ENST00000383924 113 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 SNORA51.6-201ENST00000384151 125 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 U3.30-201ENST00000391308 210 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 EIF5P1-201ENST00000400019 1231 ntBASIC4.61□□□□□ -1.67
TRIM13O60858 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM13O60858 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms