Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.15□□□□□ -1.75
PROM1O43490 CKS1BP5-201ENST00000434172 273 ntBASIC4.15□□□□□ -1.75
PROM1O43490 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PROM1O43490 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.15□□□□□ -1.75
PROM1O43490 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.15□□□□□ -1.75
PROM1O43490 AL451050.1-201ENST00000450126 415 ntBASIC4.15□□□□□ -1.75
PROM1O43490 RNU6-261P-201ENST00000459506 102 ntBASIC4.15□□□□□ -1.75
PROM1O43490 MTCO2P29-201ENST00000465212 189 ntBASIC4.15□□□□□ -1.75
PROM1O43490 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.15□□□□□ -1.75
PROM1O43490 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.15□□□□□ -1.75
PROM1O43490 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.15□□□□□ -1.75
PROM1O43490 IGLV3-26-201ENST00000520756 302 ntBASIC4.15□□□□□ -1.75
PROM1O43490 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.15□□□□□ -1.75
PROM1O43490 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.15□□□□□ -1.75
PROM1O43490 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.15□□□□□ -1.75
PROM1O43490 SETP2-201ENST00000553886 926 ntBASIC4.15□□□□□ -1.75
PROM1O43490 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.15□□□□□ -1.75
PROM1O43490 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.15□□□□□ -1.75
PROM1O43490 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.15□□□□□ -1.75
PROM1O43490 AC006270.2-201ENST00000578523 652 ntBASIC4.15□□□□□ -1.75
PROM1O43490 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.15□□□□□ -1.75
PROM1O43490 UBE2L4-201ENST00000587688 464 ntBASIC4.15□□□□□ -1.75
PROM1O43490 AC098848.2-201ENST00000588023 330 ntBASIC4.15□□□□□ -1.75
PROM1O43490 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.15□□□□□ -1.75
PROM1O43490 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.15□□□□□ -1.75
PROM1O43490 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.15□□□□□ -1.75
PROM1O43490 MIR4727-201ENST00000622232 55 ntBASIC4.15□□□□□ -1.75
PROM1O43490 AL161637.1-201ENST00000622380 412 ntBASIC4.15□□□□□ -1.75
PROM1O43490 AL158801.5-201ENST00000623123 465 ntBASIC4.15□□□□□ -1.75
PROM1O43490 MTND1P37-201ENST00000636562 264 ntBASIC4.15□□□□□ -1.75
PROM1O43490 AC138649.5-201ENST00000637456 137 ntBASIC4.15□□□□□ -1.75
PROM1O43490 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PROM1O43490 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.15□□□□□ -1.75
PROM1O43490 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.15□□□□□ -1.75
PROM1O43490 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.15□□□□□ -1.75
PROM1O43490 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PROM1O43490 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
PROM1O43490 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
PROM1O43490 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PROM1O43490 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PROM1O43490 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PROM1O43490 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.14□□□□□ -1.75
PROM1O43490 IQCB2P-201ENST00000401788 1633 ntBASIC4.14□□□□□ -1.75
PROM1O43490 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.14□□□□□ -1.75
PROM1O43490 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PROM1O43490 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
PROM1O43490 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PROM1O43490 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PROM1O43490 OR5P1P-201ENST00000299512 925 ntBASIC4.14□□□□□ -1.75
PROM1O43490 NACAP2-201ENST00000318548 624 ntBASIC4.14□□□□□ -1.75
PROM1O43490 Y_RNA.72-201ENST00000362894 103 ntBASIC4.14□□□□□ -1.75
PROM1O43490 RNU6-1097P-201ENST00000363586 107 ntBASIC4.14□□□□□ -1.75
PROM1O43490 Y_RNA.529-201ENST00000384586 119 ntBASIC4.14□□□□□ -1.75
PROM1O43490 Y_RNA.535-201ENST00000384612 99 ntBASIC4.14□□□□□ -1.75
PROM1O43490 MIR23B-201ENST00000384832 97 ntBASIC4.14□□□□□ -1.75
PROM1O43490 MIR1-2-201ENST00000384961 85 ntBASIC4.14□□□□□ -1.75
PROM1O43490 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PROM1O43490 RPL7P60-201ENST00000397636 735 ntBASIC4.14□□□□□ -1.75
PROM1O43490 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PROM1O43490 SNORA11F-201ENST00000408237 128 ntBASIC4.14□□□□□ -1.75
PROM1O43490 RNU6-1068P-201ENST00000410958 103 ntBASIC4.14□□□□□ -1.75
PROM1O43490 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.14□□□□□ -1.75
PROM1O43490 EIF1P3-201ENST00000423841 334 ntBASIC4.14□□□□□ -1.75
PROM1O43490 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.14□□□□□ -1.75
PROM1O43490 RPS15AP9-201ENST00000439856 381 ntBASIC4.14□□□□□ -1.75
PROM1O43490 AC016691.1-201ENST00000441321 413 ntBASIC4.14□□□□□ -1.75
PROM1O43490 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.14□□□□□ -1.75
PROM1O43490 RPS20P24-201ENST00000457473 361 ntBASIC4.14□□□□□ -1.75
PROM1O43490 RNU7-63P-201ENST00000459054 62 ntBASIC4.14□□□□□ -1.75
PROM1O43490 AC022034.3-201ENST00000471393 478 ntBASIC4.14□□□□□ -1.75
PROM1O43490 AC109327.1-201ENST00000471666 403 ntBASIC4.14□□□□□ -1.75
PROM1O43490 VWA8P1-201ENST00000510889 176 ntBASIC4.14□□□□□ -1.75
PROM1O43490 AC010486.1-201ENST00000511793 424 ntBASIC4.14□□□□□ -1.75
PROM1O43490 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.14□□□□□ -1.75
PROM1O43490 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.14□□□□□ -1.75
PROM1O43490 RNU6-835P-201ENST00000516974 104 ntBASIC4.14□□□□□ -1.75
PROM1O43490 AC090572.1-201ENST00000519251 160 ntBASIC4.14□□□□□ -1.75
PROM1O43490 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.14□□□□□ -1.75
PROM1O43490 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.14□□□□□ -1.75
PROM1O43490 ARL2BPP2-201ENST00000550907 489 ntBASIC4.14□□□□□ -1.75
PROM1O43490 AC068831.4-201ENST00000556118 109 ntBASIC4.14□□□□□ -1.75
PROM1O43490 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.14□□□□□ -1.75
PROM1O43490 AC007224.1-201ENST00000564410 144 ntBASIC4.14□□□□□ -1.75
PROM1O43490 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.14□□□□□ -1.75
PROM1O43490 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.14□□□□□ -1.75
PROM1O43490 HMGB1P6-201ENST00000569046 646 ntBASIC4.14□□□□□ -1.75
PROM1O43490 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.14□□□□□ -1.75
PROM1O43490 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.14□□□□□ -1.75
PROM1O43490 DISC2.1-201ENST00000612827 205 ntBASIC4.14□□□□□ -1.75
PROM1O43490 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PROM1O43490 AL138721.1-201ENST00000616756 179 ntBASIC4.14□□□□□ -1.75
PROM1O43490 AL356585.4-201ENST00000623078 1229 ntBASIC4.14□□□□□ -1.75
PROM1O43490 AC011944.2-201ENST00000624440 683 ntBASIC4.14□□□□□ -1.75
PROM1O43490 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.14□□□□□ -1.75
PROM1O43490 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.14□□□□□ -1.75
PROM1O43490 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.14□□□□□ -1.75
PROM1O43490 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PROM1O43490 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.14□□□□□ -1.75
PROM1O43490 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PROM1O43490 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms