Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC146944.2-203ENST00000502493 354 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 AC093824.1-201ENST00000508796 343 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 AC005921.1-201ENST00000510589 286 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 AC139495.1-202ENST00000513164 354 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.12□□□□□ -1.75
PHGDHO43175 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.12□□□□□ -1.75
PHGDHO43175 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.12□□□□□ -1.75
PHGDHO43175 OR4R1P-201ENST00000529879 463 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.12□□□□□ -1.75
PHGDHO43175 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.12□□□□□ -1.75
PHGDHO43175 OR4H12P-201ENST00000556269 907 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.12□□□□□ -1.75
PHGDHO43175 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.12□□□□□ -1.75
PHGDHO43175 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.12□□□□□ -1.75
PHGDHO43175 AC022655.2-201ENST00000577280 318 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 AC006116.10-201ENST00000591836 581 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.12□□□□□ -1.75
PHGDHO43175 AC025449.1-201ENST00000603896 529 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 AP001330.4-201ENST00000604350 154 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 AC017083.3-201ENST00000609955 700 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.12□□□□□ -1.75
PHGDHO43175 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PHGDHO43175 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.12□□□□□ -1.75
PHGDHO43175 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.12□□□□□ -1.75
PHGDHO43175 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PHGDHO43175 AC093536.2-201ENST00000565257 1406 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PHGDHO43175 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
PHGDHO43175 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.11□□□□□ -1.75
PHGDHO43175 LINC02471-203ENST00000641941 4752 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
PHGDHO43175 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
PHGDHO43175 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PHGDHO43175 RNU6-600P-201ENST00000362524 99 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 RN7SKP44-201ENST00000363602 316 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 RNA5SP189-201ENST00000364920 115 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 RNU1-39P-201ENST00000383897 165 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 RNU6-641P-201ENST00000384006 107 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 Y_RNA.450-201ENST00000384198 113 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 MIR558-201ENST00000384920 94 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PHGDHO43175 CIR1P3-201ENST00000405137 479 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 RPL23AP48-201ENST00000406913 488 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AL353193.1-201ENST00000421444 268 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 RPL21P66-201ENST00000426566 466 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 ELOCP14-201ENST00000428070 331 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 MED13P1-201ENST00000428342 171 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 MRPS10P2-201ENST00000431226 381 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 USP12PX-201ENST00000432383 1057 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 RPS20P5-201ENST00000434808 360 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.11□□□□□ -1.75
PHGDHO43175 AL138799.3-201ENST00000438968 350 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 ELOCP7-201ENST00000439968 331 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.11□□□□□ -1.75
PHGDHO43175 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.11□□□□□ -1.75
PHGDHO43175 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.11□□□□□ -1.75
PHGDHO43175 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PHGDHO43175 AC108860.1-201ENST00000484521 383 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 RPL23AP55-201ENST00000498163 452 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AC023141.12-201ENST00000512399 199 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 GMPSP1-201ENST00000514075 579 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.11□□□□□ -1.75
PHGDHO43175 IGKV2-38-201ENST00000517443 247 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 IGKV2D-23-201ENST00000518179 286 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 OR5AQ1P-201ENST00000527596 927 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AK6P1-201ENST00000540219 478 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AC107016.1-201ENST00000550463 337 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.11□□□□□ -1.75
PHGDHO43175 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.11□□□□□ -1.75
PHGDHO43175 AL512360.1-201ENST00000555346 234 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AL359212.1-201ENST00000556608 614 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 TVP23BP1-201ENST00000557500 617 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.11□□□□□ -1.75
PHGDHO43175 AC234771.5-201ENST00000600161 514 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.11□□□□□ -1.75
PHGDHO43175 AL606834.2-201ENST00000602954 668 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AC007363.1-201ENST00000604736 620 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AP002360.4-201ENST00000606980 481 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AC008536.2-201ENST00000607284 349 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 FAM27D1-201ENST00000612308 341 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AC004696.1-201ENST00000614345 607 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 C2orf27A-204ENST00000623058 969 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 AC110801.1-201ENST00000623590 212 ntBASIC4.11□□□□□ -1.75
PHGDHO43175 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.11□□□□□ -1.75
PHGDHO43175 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PHGDHO43175 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.11□□□□□ -1.75
PHGDHO43175 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.1□□□□□ -1.75
PHGDHO43175 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PHGDHO43175 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PHGDHO43175 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHGDHO43175 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHGDHO43175 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.1□□□□□ -1.75
PHGDHO43175 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHGDHO43175 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.1□□□□□ -1.75
PHGDHO43175 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.1□□□□□ -1.75
PHGDHO43175 RNU6-1120P-201ENST00000362988 108 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 Y_RNA.248-201ENST00000364501 109 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 RNU5E-6P-201ENST00000365574 115 ntBASIC4.1□□□□□ -1.75
PHGDHO43175 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PHGDHO43175 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms