Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 DYNLT3P1-201ENST00000378574 347 ntBASIC2.99□□□□□ -1.93
MSH4O15457 Y_RNA.408-201ENST00000383987 102 ntBASIC2.99□□□□□ -1.93
MSH4O15457 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
MSH4O15457 AL591034.1-201ENST00000407447 340 ntBASIC2.99□□□□□ -1.93
MSH4O15457 MRPL50P2-201ENST00000416821 482 ntBASIC2.99□□□□□ -1.93
MSH4O15457 SDCBPP3-201ENST00000419629 891 ntBASIC2.99□□□□□ -1.93
MSH4O15457 RPL7P30-201ENST00000420888 709 ntBASIC2.99□□□□□ -1.93
MSH4O15457 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.99□□□□□ -1.93
MSH4O15457 ARL5AP4-201ENST00000430731 512 ntBASIC2.99□□□□□ -1.93
MSH4O15457 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.99□□□□□ -1.93
MSH4O15457 MTND2P5-201ENST00000432656 1006 ntBASIC2.99□□□□□ -1.93
MSH4O15457 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.99□□□□□ -1.93
MSH4O15457 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.99□□□□□ -1.93
MSH4O15457 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.99□□□□□ -1.93
MSH4O15457 RPS23P3-201ENST00000470993 430 ntBASIC2.99□□□□□ -1.93
MSH4O15457 AC012181.1-201ENST00000479895 423 ntBASIC2.99□□□□□ -1.93
MSH4O15457 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
MSH4O15457 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.99□□□□□ -1.93
MSH4O15457 TMEM251P1-201ENST00000503717 318 ntBASIC2.99□□□□□ -1.93
MSH4O15457 HMGB1P28-201ENST00000507778 552 ntBASIC2.99□□□□□ -1.93
MSH4O15457 POU5F1P7-201ENST00000508759 541 ntBASIC2.99□□□□□ -1.93
MSH4O15457 AC006445.2-201ENST00000510061 472 ntBASIC2.99□□□□□ -1.93
MSH4O15457 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.99□□□□□ -1.93
MSH4O15457 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.99□□□□□ -1.93
MSH4O15457 RPL23AP94-201ENST00000512518 302 ntBASIC2.99□□□□□ -1.93
MSH4O15457 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.99□□□□□ -1.93
MSH4O15457 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.99□□□□□ -1.93
MSH4O15457 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
MSH4O15457 AC021451.1-201ENST00000523498 1129 ntBASIC2.99□□□□□ -1.93
MSH4O15457 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.99□□□□□ -1.93
MSH4O15457 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.99□□□□□ -1.93
MSH4O15457 AL355836.1-201ENST00000555951 870 ntBASIC2.99□□□□□ -1.93
MSH4O15457 HSPE1P3-201ENST00000559254 309 ntBASIC2.99□□□□□ -1.93
MSH4O15457 MTCO3P24-201ENST00000572729 782 ntBASIC2.99□□□□□ -1.93
MSH4O15457 MIR4672-201ENST00000583126 81 ntBASIC2.99□□□□□ -1.93
MSH4O15457 MIR4635-201ENST00000583759 79 ntBASIC2.99□□□□□ -1.93
MSH4O15457 AP001029.3-201ENST00000588063 596 ntBASIC2.99□□□□□ -1.93
MSH4O15457 AL138478.1-201ENST00000612252 832 ntBASIC2.99□□□□□ -1.93
MSH4O15457 AC107871.2-201ENST00000612894 502 ntBASIC2.99□□□□□ -1.93
MSH4O15457 AL110115.1-201ENST00000614396 364 ntBASIC2.99□□□□□ -1.93
MSH4O15457 AL121895.2-201ENST00000619558 447 ntBASIC2.99□□□□□ -1.93
MSH4O15457 AC004009.2-201ENST00000623016 728 ntBASIC2.99□□□□□ -1.93
MSH4O15457 AL356585.4-201ENST00000623078 1229 ntBASIC2.99□□□□□ -1.93
MSH4O15457 AC108206.1-201ENST00000570186 4159 ntBASIC2.99□□□□□ -1.93
MSH4O15457 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.99□□□□□ -1.93
MSH4O15457 MAPK10-362ENST00000641864 4484 ntBASIC2.99□□□□□ -1.93
MSH4O15457 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.99□□□□□ -1.93
MSH4O15457 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
MSH4O15457 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
MSH4O15457 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
MSH4O15457 MIR122-201ENST00000385044 85 ntBASIC2.98□□□□□ -1.93
MSH4O15457 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
MSH4O15457 RNU2-47P-201ENST00000410649 186 ntBASIC2.98□□□□□ -1.93
MSH4O15457 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH4O15457 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH4O15457 AL137014.1-201ENST00000420490 1226 ntBASIC2.98□□□□□ -1.93
MSH4O15457 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.98□□□□□ -1.93
MSH4O15457 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH4O15457 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.98□□□□□ -1.93
MSH4O15457 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.98□□□□□ -1.93
MSH4O15457 AL589880.1-201ENST00000448271 287 ntBASIC2.98□□□□□ -1.93
MSH4O15457 SUMO2P2-201ENST00000456482 255 ntBASIC2.98□□□□□ -1.93
MSH4O15457 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH4O15457 RPL21P131-201ENST00000497298 483 ntBASIC2.98□□□□□ -1.93
MSH4O15457 COX7A2P2-201ENST00000505291 250 ntBASIC2.98□□□□□ -1.93
MSH4O15457 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.98□□□□□ -1.93
MSH4O15457 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.98□□□□□ -1.93
MSH4O15457 SETP7-201ENST00000552169 453 ntBASIC2.98□□□□□ -1.93
MSH4O15457 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.98□□□□□ -1.93
MSH4O15457 AL132657.2-201ENST00000564417 358 ntBASIC2.98□□□□□ -1.93
MSH4O15457 MIR3162-201ENST00000581818 82 ntBASIC2.98□□□□□ -1.93
MSH4O15457 MIR4506-201ENST00000584693 77 ntBASIC2.98□□□□□ -1.93
MSH4O15457 BDH2P1-201ENST00000602288 736 ntBASIC2.98□□□□□ -1.93
MSH4O15457 AC021749.1-201ENST00000604322 607 ntBASIC2.98□□□□□ -1.93
MSH4O15457 AC069304.2-201ENST00000605154 435 ntBASIC2.98□□□□□ -1.93
MSH4O15457 AC243773.3-201ENST00000613270 256 ntBASIC2.98□□□□□ -1.93
MSH4O15457 LINC02211-204ENST00000642024 1070 ntBASIC2.98□□□□□ -1.93
MSH4O15457 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.98□□□□□ -1.93
MSH4O15457 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.98□□□□□ -1.93
MSH4O15457 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
MSH4O15457 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
MSH4O15457 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
MSH4O15457 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
MSH4O15457 OR4G11P-202ENST00000642116 1414 ntBASIC2.97□□□□□ -1.93
MSH4O15457 RNU6-1155P-201ENST00000363554 107 ntBASIC2.97□□□□□ -1.93
MSH4O15457 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
MSH4O15457 RNU6-1122P-201ENST00000384449 107 ntBASIC2.97□□□□□ -1.93
MSH4O15457 AL590084.1-201ENST00000407885 387 ntBASIC2.97□□□□□ -1.93
MSH4O15457 AC068533.2-201ENST00000411872 306 ntBASIC2.97□□□□□ -1.93
MSH4O15457 BMS1P22-201ENST00000414726 313 ntBASIC2.97□□□□□ -1.93
MSH4O15457 USP9YP36-201ENST00000424581 829 ntBASIC2.97□□□□□ -1.93
MSH4O15457 MTCO1P39-201ENST00000426148 480 ntBASIC2.97□□□□□ -1.93
MSH4O15457 AL590233.1-201ENST00000430017 456 ntBASIC2.97□□□□□ -1.93
MSH4O15457 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH4O15457 MUPP-201ENST00000438111 566 ntBASIC2.97□□□□□ -1.93
MSH4O15457 MTND2P20-201ENST00000440805 661 ntBASIC2.97□□□□□ -1.93
MSH4O15457 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH4O15457 RPL23AP76-201ENST00000441860 458 ntBASIC2.97□□□□□ -1.93
MSH4O15457 MRPL50P4-201ENST00000446432 475 ntBASIC2.97□□□□□ -1.93
MSH4O15457 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms