Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.97□□□□□ -1.93
CDX4O14627 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.97□□□□□ -1.93
CDX4O14627 AC008015.1-201ENST00000555505 465 ntBASIC2.97□□□□□ -1.93
CDX4O14627 CYCSP39-201ENST00000565821 309 ntBASIC2.97□□□□□ -1.93
CDX4O14627 ZNF192P1-203ENST00000565888 810 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AL512347.1-201ENST00000566420 503 ntBASIC2.97□□□□□ -1.93
CDX4O14627 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
CDX4O14627 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.97□□□□□ -1.93
CDX4O14627 AL035413.2-201ENST00000604801 525 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AL034351.1-201ENST00000605288 668 ntBASIC2.97□□□□□ -1.93
CDX4O14627 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.97□□□□□ -1.93
CDX4O14627 TUG1_1.1-201ENST00000610654 145 ntBASIC2.97□□□□□ -1.93
CDX4O14627 AC087241.4-201ENST00000612441 480 ntBASIC2.97□□□□□ -1.93
CDX4O14627 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDX4O14627 CR381572.1-201ENST00000625098 102 ntBASIC2.97□□□□□ -1.93
CDX4O14627 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.97□□□□□ -1.93
CDX4O14627 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDX4O14627 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CDX4O14627 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CDX4O14627 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDX4O14627 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDX4O14627 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDX4O14627 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDX4O14627 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CDX4O14627 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CDX4O14627 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CDX4O14627 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDX4O14627 CR381670.1-201ENST00000624291 1693 ntBASIC2.96□□□□□ -1.94
CDX4O14627 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDX4O14627 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDX4O14627 SNORD6-201ENST00000365444 73 ntBASIC2.96□□□□□ -1.94
CDX4O14627 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX4O14627 SKINT1L-201ENST00000401057 817 ntBASIC2.96□□□□□ -1.94
CDX4O14627 MIR1302-8-201ENST00000408342 128 ntBASIC2.96□□□□□ -1.94
CDX4O14627 RNU4-72P-201ENST00000410754 173 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX4O14627 AC090960.1-201ENST00000421072 306 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AL159169.1-201ENST00000421119 127 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AL645937.1-202ENST00000421799 937 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AC063976.3-201ENST00000426849 329 ntBASIC2.96□□□□□ -1.94
CDX4O14627 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX4O14627 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.96□□□□□ -1.94
CDX4O14627 UBE2D3P1-201ENST00000436669 444 ntBASIC2.96□□□□□ -1.94
CDX4O14627 MTND4P32-201ENST00000437189 1237 ntBASIC2.96□□□□□ -1.94
CDX4O14627 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CDX4O14627 AC092473.1-201ENST00000441098 221 ntBASIC2.96□□□□□ -1.94
CDX4O14627 RPL18AP17-201ENST00000455326 198 ntBASIC2.96□□□□□ -1.94
CDX4O14627 ANKRD26P4-201ENST00000455755 950 ntBASIC2.96□□□□□ -1.94
CDX4O14627 RNU7-170P-201ENST00000459303 61 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AC117440.1-201ENST00000474107 571 ntBASIC2.96□□□□□ -1.94
CDX4O14627 RPL7P18-201ENST00000478965 734 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AC114967.1-201ENST00000504890 259 ntBASIC2.96□□□□□ -1.94
CDX4O14627 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.96□□□□□ -1.94
CDX4O14627 HSPA8P13-201ENST00000523715 472 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AL356057.1-201ENST00000533798 831 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX4O14627 DUXAP1-201ENST00000556632 463 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.96□□□□□ -1.94
CDX4O14627 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.96□□□□□ -1.94
CDX4O14627 AC109446.2-201ENST00000567872 497 ntBASIC2.96□□□□□ -1.94
CDX4O14627 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX4O14627 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.96□□□□□ -1.94
CDX4O14627 AL158042.1-201ENST00000605338 460 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AC006270.3-201ENST00000605967 1036 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AC064807.4-201ENST00000607201 407 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC2.96□□□□□ -1.94
CDX4O14627 AC006329.2-201ENST00000611491 394 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AL139418.1-201ENST00000613613 177 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AC244205.2-202ENST00000635781 342 ntBASIC2.96□□□□□ -1.94
CDX4O14627 AC103706.2-201ENST00000638080 240 ntBASIC2.96□□□□□ -1.94
CDX4O14627 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CDX4O14627 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDX4O14627 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
CDX4O14627 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDX4O14627 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.95□□□□□ -1.94
CDX4O14627 AL353746.1-201ENST00000566293 6881 ntBASIC2.95□□□□□ -1.94
CDX4O14627 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDX4O14627 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDX4O14627 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDX4O14627 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CDX4O14627 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CDX4O14627 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDX4O14627 RNA5SP322-201ENST00000363617 119 ntBASIC2.95□□□□□ -1.94
CDX4O14627 SNORA51.2-201ENST00000364595 132 ntBASIC2.95□□□□□ -1.94
CDX4O14627 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX4O14627 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDX4O14627 SNORD116-1-201ENST00000384335 95 ntBASIC2.95□□□□□ -1.94
CDX4O14627 AL136116.1-201ENST00000403591 381 ntBASIC2.95□□□□□ -1.94
CDX4O14627 MIR1284-201ENST00000408337 120 ntBASIC2.95□□□□□ -1.94
CDX4O14627 RNU6-757P-201ENST00000410334 100 ntBASIC2.95□□□□□ -1.94
CDX4O14627 RNA5SP508-201ENST00000411327 119 ntBASIC2.95□□□□□ -1.94
CDX4O14627 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.95□□□□□ -1.94
CDX4O14627 FNDC3CP-201ENST00000420795 1155 ntBASIC2.95□□□□□ -1.94
CDX4O14627 AC019097.1-201ENST00000424783 735 ntBASIC2.95□□□□□ -1.94
CDX4O14627 AL593851.1-201ENST00000426171 157 ntBASIC2.95□□□□□ -1.94
CDX4O14627 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.95□□□□□ -1.94
CDX4O14627 AL445567.1-201ENST00000439121 144 ntBASIC2.95□□□□□ -1.94
CDX4O14627 MTND3P1-201ENST00000441336 220 ntBASIC2.95□□□□□ -1.94
CDX4O14627 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.95□□□□□ -1.94
CDX4O14627 AL662791.1-201ENST00000441992 928 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms