Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.83□□□□□ -1.8
CUX2O14529 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.83□□□□□ -1.8
CUX2O14529 AP001542.2-201ENST00000593141 364 ntBASIC3.83□□□□□ -1.8
CUX2O14529 LLPHP1-201ENST00000603571 367 ntBASIC3.83□□□□□ -1.8
CUX2O14529 MIR8084-201ENST00000614105 89 ntBASIC3.83□□□□□ -1.8
CUX2O14529 AC002076.2-201ENST00000617362 122 ntBASIC3.83□□□□□ -1.8
CUX2O14529 AC092608.3-201ENST00000625017 386 ntBASIC3.83□□□□□ -1.8
CUX2O14529 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CUX2O14529 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CUX2O14529 RPL36AP6-201ENST00000435770 321 ntBASIC3.82□□□□□ -1.8
CUX2O14529 AC002542.1-201ENST00000440683 193 ntBASIC3.82□□□□□ -1.8
CUX2O14529 NDUFS5P3-201ENST00000450668 321 ntBASIC3.82□□□□□ -1.8
CUX2O14529 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.82□□□□□ -1.8
CUX2O14529 AC008379.1-201ENST00000463655 464 ntBASIC3.82□□□□□ -1.8
CUX2O14529 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.82□□□□□ -1.8
CUX2O14529 SNX5P1-201ENST00000505757 1041 ntBASIC3.82□□□□□ -1.8
CUX2O14529 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.82□□□□□ -1.8
CUX2O14529 RN7SKP277-201ENST00000516895 283 ntBASIC3.82□□□□□ -1.8
CUX2O14529 AC025881.1-201ENST00000518851 512 ntBASIC3.82□□□□□ -1.8
CUX2O14529 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.82□□□□□ -1.8
CUX2O14529 MTND2P26-201ENST00000528255 1029 ntBASIC3.82□□□□□ -1.8
CUX2O14529 AC124283.4-201ENST00000581815 456 ntBASIC3.82□□□□□ -1.8
CUX2O14529 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.82□□□□□ -1.8
CUX2O14529 AC083899.3-201ENST00000603413 594 ntBASIC3.82□□□□□ -1.8
CUX2O14529 AC021851.1-201ENST00000608537 1082 ntBASIC3.82□□□□□ -1.8
CUX2O14529 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.82□□□□□ -1.8
CUX2O14529 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CUX2O14529 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CUX2O14529 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CUX2O14529 RN7SKP226-201ENST00000364912 300 ntBASIC3.81□□□□□ -1.8
CUX2O14529 SNORA11.4-201ENST00000408823 129 ntBASIC3.81□□□□□ -1.8
CUX2O14529 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
CUX2O14529 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.81□□□□□ -1.8
CUX2O14529 NUP35P2-201ENST00000416748 943 ntBASIC3.81□□□□□ -1.8
CUX2O14529 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.81□□□□□ -1.8
CUX2O14529 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.81□□□□□ -1.8
CUX2O14529 MTND1P33-201ENST00000446251 917 ntBASIC3.81□□□□□ -1.8
CUX2O14529 AL096803.2-201ENST00000450032 677 ntBASIC3.81□□□□□ -1.8
CUX2O14529 AL645939.1-201ENST00000453429 797 ntBASIC3.81□□□□□ -1.8
CUX2O14529 RPL37P6-202ENST00000464216 403 ntBASIC3.81□□□□□ -1.8
CUX2O14529 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.81□□□□□ -1.8
CUX2O14529 AP001180.3-201ENST00000582221 145 ntBASIC3.81□□□□□ -1.8
CUX2O14529 VN1R88P-201ENST00000596787 292 ntBASIC3.81□□□□□ -1.8
CUX2O14529 AC005776.1-201ENST00000603164 290 ntBASIC3.81□□□□□ -1.8
CUX2O14529 AC006254.3-201ENST00000603353 884 ntBASIC3.81□□□□□ -1.8
CUX2O14529 AL356280.1-201ENST00000603614 379 ntBASIC3.81□□□□□ -1.8
CUX2O14529 BNIP3P4-201ENST00000604946 565 ntBASIC3.81□□□□□ -1.8
CUX2O14529 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.81□□□□□ -1.8
CUX2O14529 AC245517.5-201ENST00000611529 162 ntBASIC3.81□□□□□ -1.8
CUX2O14529 AC006213.5-201ENST00000619673 288 ntBASIC3.81□□□□□ -1.8
CUX2O14529 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CUX2O14529 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.81□□□□□ -1.8
CUX2O14529 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CUX2O14529 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CUX2O14529 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
CUX2O14529 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CUX2O14529 AC073055.1-201ENST00000456901 1621 ntBASIC3.8□□□□□ -1.8
CUX2O14529 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CUX2O14529 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CUX2O14529 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CUX2O14529 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.8□□□□□ -1.8
CUX2O14529 FAT1P1-201ENST00000406588 507 ntBASIC3.8□□□□□ -1.8
CUX2O14529 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.8□□□□□ -1.8
CUX2O14529 AL445646.1-201ENST00000431784 216 ntBASIC3.8□□□□□ -1.8
CUX2O14529 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.8□□□□□ -1.8
CUX2O14529 BX248409.1-201ENST00000455497 255 ntBASIC3.8□□□□□ -1.8
CUX2O14529 SNORD108-201ENST00000459332 71 ntBASIC3.8□□□□□ -1.8
CUX2O14529 RPS27P27-201ENST00000498779 255 ntBASIC3.8□□□□□ -1.8
CUX2O14529 MTCO2P9-201ENST00000503214 694 ntBASIC3.8□□□□□ -1.8
CUX2O14529 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.8□□□□□ -1.8
CUX2O14529 OR6C73P-201ENST00000546432 358 ntBASIC3.8□□□□□ -1.8
CUX2O14529 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.8□□□□□ -1.8
CUX2O14529 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.8□□□□□ -1.8
CUX2O14529 AC023043.3-201ENST00000593113 385 ntBASIC3.8□□□□□ -1.8
CUX2O14529 AC121761.2-201ENST00000617300 689 ntBASIC3.8□□□□□ -1.8
CUX2O14529 AC073348.1-201ENST00000623002 331 ntBASIC3.8□□□□□ -1.8
CUX2O14529 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.8□□□□□ -1.8
CUX2O14529 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CUX2O14529 AC092326.2-201ENST00000624772 1561 ntBASIC3.8□□□□□ -1.8
CUX2O14529 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CUX2O14529 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CUX2O14529 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CUX2O14529 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.79□□□□□ -1.8
CUX2O14529 DYNLT3P1-201ENST00000378574 347 ntBASIC3.79□□□□□ -1.8
CUX2O14529 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CUX2O14529 BX664727.1-201ENST00000416024 466 ntBASIC3.79□□□□□ -1.8
CUX2O14529 UBE2D3P3-201ENST00000426992 425 ntBASIC3.79□□□□□ -1.8
CUX2O14529 PSMA2P3-201ENST00000429685 675 ntBASIC3.79□□□□□ -1.8
CUX2O14529 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.79□□□□□ -1.8
CUX2O14529 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.79□□□□□ -1.8
CUX2O14529 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.79□□□□□ -1.8
CUX2O14529 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.79□□□□□ -1.8
CUX2O14529 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.79□□□□□ -1.8
CUX2O14529 RNU6-488P-201ENST00000515918 99 ntBASIC3.79□□□□□ -1.8
CUX2O14529 RNU6-334P-201ENST00000517072 102 ntBASIC3.79□□□□□ -1.8
CUX2O14529 AC135279.1-201ENST00000543493 504 ntBASIC3.79□□□□□ -1.8
CUX2O14529 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.79□□□□□ -1.8
CUX2O14529 MIR3683-201ENST00000580847 82 ntBASIC3.79□□□□□ -1.8
CUX2O14529 RPAP2P1-201ENST00000603626 1168 ntBASIC3.79□□□□□ -1.8
CUX2O14529 AC091834.1-201ENST00000614543 472 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms