Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SDCBPO00560 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SDCBPO00560 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SDCBPO00560 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.87□□□□□ -2.11
SDCBPO00560 Z99496.1-201ENST00000469424 1477 ntBASIC1.87□□□□□ -2.11
SDCBPO00560 SNORA36C-201ENST00000384289 132 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SDCBPO00560 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 AC009963.1-201ENST00000417265 157 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 RPL7P30-201ENST00000420888 709 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.86□□□□□ -2.11
SDCBPO00560 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 AC012497.1-201ENST00000429392 575 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.86□□□□□ -2.11
SDCBPO00560 RPL31P50-201ENST00000471002 296 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 AC004263.1-201ENST00000479327 332 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.86□□□□□ -2.11
SDCBPO00560 AC109486.1-201ENST00000486833 374 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 AC109329.2-201ENST00000519658 482 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 AC087808.1-201ENST00000520501 361 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.86□□□□□ -2.11
SDCBPO00560 AC087272.1-201ENST00000523624 533 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.86□□□□□ -2.11
SDCBPO00560 AC018630.1-201ENST00000541376 925 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 ISCA1P3-201ENST00000577104 373 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 LRRC37A5P-203ENST00000580181 585 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 DNAJC19P3-201ENST00000594491 331 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 AC016911.1-201ENST00000613297 452 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 AC034102.8-201ENST00000615146 484 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SDCBPO00560 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SDCBPO00560 AL513185.3-201ENST00000433335 1300 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 AC008432.1-201ENST00000615912 1320 ntBASIC1.86□□□□□ -2.11
SDCBPO00560 RNU5D-1-201ENST00000363299 116 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 SET-203ENST00000372688 801 ntTSL 2 BASIC1.85□□□□□ -2.11
SDCBPO00560 SNORA67.4-201ENST00000384688 142 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 U3.29-201ENST00000391296 212 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.85□□□□□ -2.11
SDCBPO00560 RNU6-77P-201ENST00000410554 91 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 HMGB1P11-201ENST00000413899 637 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.85□□□□□ -2.11
SDCBPO00560 TMEM167AP1-201ENST00000423409 219 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.85□□□□□ -2.11
SDCBPO00560 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.85□□□□□ -2.11
SDCBPO00560 HIGD1AP2-201ENST00000446367 280 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 AC004022.1-201ENST00000447766 1066 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 AC090255.1-201ENST00000495779 349 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.85□□□□□ -2.11
SDCBPO00560 HMGB3P3-201ENST00000510526 400 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 RNA5SP281-201ENST00000516504 135 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.85□□□□□ -2.11
SDCBPO00560 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.85□□□□□ -2.11
SDCBPO00560 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.85□□□□□ -2.11
SDCBPO00560 IGJP1-201ENST00000522682 475 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.85□□□□□ -2.11
SDCBPO00560 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SDCBPO00560 AC007115.1-201ENST00000546853 234 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.85□□□□□ -2.11
SDCBPO00560 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.85□□□□□ -2.11
SDCBPO00560 ATP5F1P7-201ENST00000567330 760 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.85□□□□□ -2.11
SDCBPO00560 SNORD39.3-201ENST00000584451 71 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 AP004247.3-201ENST00000608682 624 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 AC107294.1-201ENST00000609524 467 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 AC096586.1-201ENST00000610267 561 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 AC068722.2-201ENST00000618734 544 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 MIR6132-201ENST00000622083 109 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.85□□□□□ -2.11
SDCBPO00560 AC243829.7-201ENST00000633081 225 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 MFSD8-245ENST00000641743 948 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 AP000553.5-201ENST00000641933 54 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 AL359693.1-201ENST00000614959 2407 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 MTCO1P6-201ENST00000481192 1384 ntBASIC1.85□□□□□ -2.11
SDCBPO00560 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
SDCBPO00560 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
SDCBPO00560 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
SDCBPO00560 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.84□□□□□ -2.11
SDCBPO00560 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SDCBPO00560 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SDCBPO00560 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SDCBPO00560 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SDCBPO00560 RNU1-91P-201ENST00000364746 163 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SDCBPO00560 RNU6-301P-201ENST00000384277 107 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 SNORA51.11-201ENST00000384442 131 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SDCBPO00560 MTND1P23-201ENST00000416931 372 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.84□□□□□ -2.11
SDCBPO00560 Z75741.2-201ENST00000417272 1167 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.84□□□□□ -2.11
SDCBPO00560 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.84□□□□□ -2.11
SDCBPO00560 AC099677.1-201ENST00000420575 175 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 AL009174.1-201ENST00000426577 416 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 MTND4LP14-201ENST00000429447 288 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 RPL31P54-201ENST00000429803 370 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.84□□□□□ -2.11
SDCBPO00560 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.84□□□□□ -2.11
SDCBPO00560 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms