Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL022099.1-201ENST00000604551 712 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 AP002826.1-201ENST00000608835 315 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 AC006249.1-201ENST00000621223 471 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 AL353748.2-201ENST00000622148 471 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 MAPK10-322ENST00000641485 4530 ntBASIC2.36□□□□□ -2.03
UPK1AO00322 AC080100.1-201ENST00000624239 5356 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
UPK1AO00322 RNU6-492P-201ENST00000363035 104 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 RNU6-1027P-201ENST00000383998 107 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 AL162578.1-201ENST00000406202 378 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 RNA5SP184-201ENST00000411071 108 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 AC092634.6-201ENST00000418558 192 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 NUP35P1-201ENST00000422734 947 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 MTCO2P1-201ENST00000424648 477 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 MTCYBP32-201ENST00000427945 1084 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.35□□□□□ -2.03
UPK1AO00322 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.35□□□□□ -2.03
UPK1AO00322 EZH2P1-201ENST00000431167 291 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.35□□□□□ -2.03
UPK1AO00322 AL121871.1-201ENST00000443413 436 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.35□□□□□ -2.03
UPK1AO00322 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.35□□□□□ -2.03
UPK1AO00322 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
UPK1AO00322 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.35□□□□□ -2.03
UPK1AO00322 SNORA48.10-201ENST00000516965 160 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.35□□□□□ -2.03
UPK1AO00322 AP003467.2-201ENST00000520175 319 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.35□□□□□ -2.03
UPK1AO00322 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.35□□□□□ -2.03
UPK1AO00322 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.35□□□□□ -2.03
UPK1AO00322 ZNF971P-201ENST00000562068 1249 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.35□□□□□ -2.03
UPK1AO00322 DUXAP3-201ENST00000603616 594 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 AL137843.1-201ENST00000605078 385 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
UPK1AO00322 AL513185.3-201ENST00000433335 1300 ntBASIC2.35□□□□□ -2.03
UPK1AO00322 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
UPK1AO00322 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
UPK1AO00322 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
UPK1AO00322 RNA5SP456-201ENST00000364002 114 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 RNU6-468P-201ENST00000384003 109 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 RNU6-878P-201ENST00000384578 110 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 MIR27B-201ENST00000385129 97 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 AL136372.1-201ENST00000403060 228 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.34□□□□□ -2.03
UPK1AO00322 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.34□□□□□ -2.03
UPK1AO00322 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.34□□□□□ -2.03
UPK1AO00322 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.34□□□□□ -2.03
UPK1AO00322 AL109933.2-201ENST00000452651 260 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.34□□□□□ -2.03
UPK1AO00322 AC107222.1-201ENST00000510899 637 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 AC023632.1-201ENST00000518463 375 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.34□□□□□ -2.03
UPK1AO00322 AC078814.3-201ENST00000553036 491 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 DNAJC8P1-201ENST00000554535 372 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 AC044913.1-201ENST00000557200 430 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.34□□□□□ -2.03
UPK1AO00322 AC090330.1-201ENST00000588646 764 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.34□□□□□ -2.03
UPK1AO00322 AC012443.1-201ENST00000605605 231 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 AP005137.2-201ENST00000609238 400 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 AL356585.4-201ENST00000623078 1229 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 AC080188.3-201ENST00000624842 748 ntBASIC2.34□□□□□ -2.03
UPK1AO00322 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.34□□□□□ -2.03
UPK1AO00322 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.34□□□□□ -2.04
UPK1AO00322 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
UPK1AO00322 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
UPK1AO00322 MIR21-201ENST00000362134 72 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 SNORA5B-201ENST00000363786 132 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 RNU6-657P-201ENST00000383904 107 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 MIR196B-201ENST00000384852 84 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 NDUFB4P4-201ENST00000404822 243 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.33□□□□□ -2.04
UPK1AO00322 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK1AO00322 RAC1P8-201ENST00000427086 527 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK1AO00322 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK1AO00322 Z82190.1-201ENST00000454534 490 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 AC092757.1-201ENST00000467293 467 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 AC004924.1-201ENST00000480160 781 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.33□□□□□ -2.04
UPK1AO00322 KLRA1P-201ENST00000503499 986 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 AC008628.1-201ENST00000508663 265 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.33□□□□□ -2.04
UPK1AO00322 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.33□□□□□ -2.04
UPK1AO00322 RN7SKP24-201ENST00000515888 284 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 RNA5SP320-201ENST00000516263 124 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 SNORA31.11-201ENST00000516528 139 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 SNORA31.15-201ENST00000516771 132 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 snoZ278.1-201ENST00000517059 112 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.33□□□□□ -2.04
UPK1AO00322 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.33□□□□□ -2.04
UPK1AO00322 AP003049.1-201ENST00000529418 457 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 CYB5AP5-201ENST00000549779 389 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK1AO00322 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK1AO00322 MIR4666A-201ENST00000580160 79 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.33□□□□□ -2.04
UPK1AO00322 AC011471.1-201ENST00000585766 187 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms