Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC007275.1-201ENST00000621243 671 ntBASIC2.55□□□□□ -2
DFFAO00273 SCARNA15.3-201ENST00000626315 122 ntBASIC2.55□□□□□ -2
DFFAO00273 SCARNA4.1-201ENST00000628597 123 ntBASIC2.55□□□□□ -2
DFFAO00273 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
DFFAO00273 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.54□□□□□ -2
DFFAO00273 AC138915.1-201ENST00000565427 1685 ntBASIC2.54□□□□□ -2
DFFAO00273 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.54□□□□□ -2
DFFAO00273 RNU6-657P-201ENST00000383904 107 ntBASIC2.54□□□□□ -2
DFFAO00273 MIR217-201ENST00000384817 110 ntBASIC2.54□□□□□ -2
DFFAO00273 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.54□□□□□ -2
DFFAO00273 RPL17P50-201ENST00000396131 546 ntBASIC2.54□□□□□ -2
DFFAO00273 ARF4P3-201ENST00000397387 509 ntBASIC2.54□□□□□ -2
DFFAO00273 PTGES3P2-201ENST00000407942 482 ntBASIC2.54□□□□□ -2
DFFAO00273 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.54□□□□□ -2
DFFAO00273 BX682237.1-201ENST00000415016 335 ntBASIC2.54□□□□□ -2
DFFAO00273 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.54□□□□□ -2
DFFAO00273 RPL17P35-201ENST00000432217 549 ntBASIC2.54□□□□□ -2
DFFAO00273 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.54□□□□□ -2
DFFAO00273 AC104389.3-201ENST00000445629 235 ntBASIC2.54□□□□□ -2
DFFAO00273 AC234775.1-201ENST00000454247 670 ntBASIC2.54□□□□□ -2
DFFAO00273 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.54□□□□□ -2
DFFAO00273 AC009901.1-201ENST00000506703 541 ntBASIC2.54□□□□□ -2
DFFAO00273 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.54□□□□□ -2
DFFAO00273 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.54□□□□□ -2
DFFAO00273 SNORA48.10-201ENST00000516965 160 ntBASIC2.54□□□□□ -2
DFFAO00273 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.54□□□□□ -2
DFFAO00273 AC087373.1-201ENST00000524920 491 ntBASIC2.54□□□□□ -2
DFFAO00273 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.54□□□□□ -2
DFFAO00273 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.54□□□□□ -2
DFFAO00273 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.54□□□□□ -2
DFFAO00273 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.54□□□□□ -2
DFFAO00273 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.54□□□□□ -2
DFFAO00273 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.54□□□□□ -2
DFFAO00273 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.54□□□□□ -2
DFFAO00273 GLUD1P4-201ENST00000590914 418 ntBASIC2.54□□□□□ -2
DFFAO00273 AL356575.1-201ENST00000603008 283 ntBASIC2.54□□□□□ -2
DFFAO00273 AC006023.1-201ENST00000603944 259 ntBASIC2.54□□□□□ -2
DFFAO00273 AC007621.1-201ENST00000604544 437 ntBASIC2.54□□□□□ -2
DFFAO00273 NUTF2P8-201ENST00000604593 363 ntBASIC2.54□□□□□ -2
DFFAO00273 HSPE1P7-201ENST00000604681 321 ntBASIC2.54□□□□□ -2
DFFAO00273 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.54□□□□□ -2
DFFAO00273 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.54□□□□□ -2
DFFAO00273 U4.3-201ENST00000621047 82 ntBASIC2.54□□□□□ -2
DFFAO00273 AL356585.4-201ENST00000623078 1229 ntBASIC2.54□□□□□ -2
DFFAO00273 AC002064.3-201ENST00000623448 346 ntBASIC2.54□□□□□ -2
DFFAO00273 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.53□□□□□ -2
DFFAO00273 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
DFFAO00273 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.53□□□□□ -2
DFFAO00273 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
DFFAO00273 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
DFFAO00273 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.53□□□□□ -2
DFFAO00273 RNA5SP456-201ENST00000364002 114 ntBASIC2.53□□□□□ -2
DFFAO00273 Y_RNA.510-201ENST00000384511 114 ntBASIC2.53□□□□□ -2
DFFAO00273 MIR634-201ENST00000385208 97 ntBASIC2.53□□□□□ -2
DFFAO00273 AL356057.2-201ENST00000403318 432 ntBASIC2.53□□□□□ -2
DFFAO00273 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.53□□□□□ -2
DFFAO00273 AL137014.1-201ENST00000420490 1226 ntBASIC2.53□□□□□ -2
DFFAO00273 AC098826.1-201ENST00000433943 471 ntBASIC2.53□□□□□ -2
DFFAO00273 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.53□□□□□ -2
DFFAO00273 NDUFB4P6-201ENST00000436819 366 ntBASIC2.53□□□□□ -2
DFFAO00273 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.53□□□□□ -2
DFFAO00273 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.53□□□□□ -2
DFFAO00273 RFC5P1-201ENST00000454419 874 ntBASIC2.53□□□□□ -2
DFFAO00273 RPS3P1-201ENST00000456781 192 ntBASIC2.53□□□□□ -2
DFFAO00273 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.53□□□□□ -2
DFFAO00273 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.53□□□□□ -2
DFFAO00273 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.53□□□□□ -2
DFFAO00273 AC098799.1-201ENST00000504752 800 ntBASIC2.53□□□□□ -2
DFFAO00273 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.53□□□□□ -2
DFFAO00273 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.53□□□□□ -2
DFFAO00273 OR5AK1P-201ENST00000524837 922 ntBASIC2.53□□□□□ -2
DFFAO00273 AC090502.2-201ENST00000549267 280 ntBASIC2.53□□□□□ -2
DFFAO00273 MTCYBP27-201ENST00000555160 670 ntBASIC2.53□□□□□ -2
DFFAO00273 ZNF971P-201ENST00000562068 1249 ntBASIC2.53□□□□□ -2
DFFAO00273 MIR3670-2-201ENST00000582974 65 ntBASIC2.53□□□□□ -2
DFFAO00273 MIR3670-1-201ENST00000584160 65 ntBASIC2.53□□□□□ -2
DFFAO00273 MIR3670-3-201ENST00000584855 65 ntBASIC2.53□□□□□ -2
DFFAO00273 RPAP2P1-201ENST00000603626 1168 ntBASIC2.53□□□□□ -2
DFFAO00273 AP003973.1-201ENST00000604639 691 ntBASIC2.53□□□□□ -2
DFFAO00273 AP005137.2-201ENST00000609238 400 ntBASIC2.53□□□□□ -2
DFFAO00273 MIR3670-4-201ENST00000612260 65 ntBASIC2.53□□□□□ -2
DFFAO00273 VN1R7P-201ENST00000619242 903 ntBASIC2.53□□□□□ -2
DFFAO00273 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.53□□□□□ -2
DFFAO00273 AC080188.3-201ENST00000624842 748 ntBASIC2.53□□□□□ -2
DFFAO00273 AC091948.2-201ENST00000636510 279 ntBASIC2.53□□□□□ -2
DFFAO00273 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
DFFAO00273 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.53□□□□□ -2
DFFAO00273 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
DFFAO00273 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
DFFAO00273 RNU6-354P-201ENST00000383862 107 ntBASIC2.52□□□□□ -2.01
DFFAO00273 RNU6-610P-201ENST00000384264 107 ntBASIC2.52□□□□□ -2.01
DFFAO00273 RNU6-882P-201ENST00000391025 103 ntBASIC2.52□□□□□ -2.01
DFFAO00273 RPL22P22-201ENST00000395439 379 ntBASIC2.52□□□□□ -2.01
DFFAO00273 AL355615.1-201ENST00000406187 641 ntBASIC2.52□□□□□ -2.01
DFFAO00273 RNU2-28P-201ENST00000410457 189 ntBASIC2.52□□□□□ -2.01
DFFAO00273 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.52□□□□□ -2.01
DFFAO00273 MTCO3P1-205ENST00000422088 832 ntBASIC2.52□□□□□ -2.01
DFFAO00273 Z93242.1-201ENST00000427102 353 ntBASIC2.52□□□□□ -2.01
DFFAO00273 MTCYBP32-201ENST00000427945 1084 ntBASIC2.52□□□□□ -2.01
DFFAO00273 FCF1P1-201ENST00000432690 571 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms