Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC022662.1-201ENST00000580252 331 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AL109653.1-201ENST00000603091 248 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AL390240.1-201ENST00000612950 384 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 AC004925.1-201ENST00000624256 2706 ntBASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM49D1C9J1S8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC107982.1-201ENST00000507171 1300 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AL359893.1-201ENST00000447628 1580 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC000403.1-201ENST00000613696 3585 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 RNU6-374P-201ENST00000364146 108 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 RNU6-777P-201ENST00000364265 104 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 RNU6-851P-201ENST00000384565 107 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 DHFRP6-201ENST00000401776 268 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 TOMM22P1-201ENST00000418578 312 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC005517.2-201ENST00000424673 553 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 RPL21P66-201ENST00000426566 466 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 UBE2V1P1-201ENST00000430836 445 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 EEF1E1P1-201ENST00000446998 430 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 MTCO2P6-201ENST00000463134 685 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC010486.2-201ENST00000505572 483 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 HMGB1P28-201ENST00000507778 552 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 MTCO3P44-201ENST00000510977 541 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC119751.5-201ENST00000514077 770 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 RNU6-488P-201ENST00000515918 99 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 RNU5A-4P-201ENST00000516588 111 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 RNU6-1261P-201ENST00000517194 104 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AP001189.2-201ENST00000527320 189 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 UBTFL10-201ENST00000528532 562 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 NBEAP1-201ENST00000554452 979 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC145350.1-201ENST00000567426 208 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC011260.1-201ENST00000578420 472 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC012493.2-201ENST00000595083 291 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC006539.2-201ENST00000601729 572 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AL031281.1-201ENST00000604049 488 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AL359198.2-201ENST00000611836 194 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 PABPC1P7-201ENST00000413177 1513 ntBASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM49D1C9J1S8 AC092447.7-201ENST00000422212 1621 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 OR5H2-201ENST00000355273 945 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 RNU6-343P-201ENST00000364709 104 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 Y_RNA.548-201ENST00000384656 105 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 MIR649-201ENST00000384843 97 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 MIR592-201ENST00000384959 97 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 MIR483-201ENST00000385070 76 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 SNORA48.5-201ENST00000391143 135 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 PIGPP2-201ENST00000411569 458 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 HMGB1P49-201ENST00000418882 569 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 CETN4P-201ENST00000432407 469 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 MTCYBP34-201ENST00000439552 670 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 RNU7-125P-201ENST00000458760 62 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 MTND1P16-201ENST00000465177 898 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 AC092757.1-201ENST00000467293 467 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 RPS26P21-201ENST00000475397 348 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 AC147055.4-201ENST00000504399 745 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 RNU6-1129P-201ENST00000515964 104 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 SCARNA13-201ENST00000516672 275 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 RNU6-1073P-201ENST00000517182 106 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 AC109446.2-201ENST00000567872 497 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 AC034268.2-201ENST00000571784 482 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 AC022069.1-201ENST00000582910 658 ntBASIC2.75□□□□□ -1.97
TRIM49D1C9J1S8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms