Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 SNORA57.3-201ENST00000411095 141 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 MTCO3P12-201ENST00000416718 547 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AC004866.2-201ENST00000438285 481 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 BNIP3P2-201ENST00000441221 577 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 HMGB3P9-201ENST00000441799 583 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 GAPDHP27-201ENST00000447427 1020 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 CACYBPP2-201ENST00000453625 678 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AC110792.1-201ENST00000491826 472 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AC139783.2-201ENST00000504847 1145 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 RNU6-1092P-201ENST00000516955 87 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 FTH1P11-201ENST00000517577 551 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AP004371.1-201ENST00000525240 214 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 PHBP17-201ENST00000528576 541 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AC010653.1-201ENST00000571108 881 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AC006116.10-201ENST00000591836 581 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AL031666.3-201ENST00000609320 1006 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AC024940.5-201ENST00000622889 474 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AC063976.2-201ENST00000425667 3556 ntBASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCDC85CA6NKD9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
CCDC85CA6NKD9 AC125257.1-201ENST00000560400 2930 ntBASIC4.96□□□□□ -1.61
CCDC85CA6NKD9 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.61
CCDC85CA6NKD9 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CCDC85CA6NKD9 BDP1P-201ENST00000582658 1990 ntBASIC4.96□□□□□ -1.61
CCDC85CA6NKD9 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.96□□□□□ -1.61
CCDC85CA6NKD9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 Y_RNA.255-201ENST00000364581 97 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 U3.15-201ENST00000365398 212 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 Y_RNA.381-201ENST00000365666 102 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 CTSL3P-202ENST00000412179 788 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 SDCBPP3-201ENST00000419629 891 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 EIF1P3-201ENST00000423841 334 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 AP000907.1-201ENST00000428428 510 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 AL451050.1-201ENST00000450126 415 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 AC233702.1-201ENST00000482905 502 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 AL163973.1-201ENST00000484753 577 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 RN7SL691P-201ENST00000494487 301 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 NIPA2P2-201ENST00000496376 1083 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 AC116562.3-201ENST00000506136 177 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 Y_RNA.702-201ENST00000516843 96 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 SNORD60.2-201ENST00000516883 86 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 IGKV2D-19-201ENST00000523346 262 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 AC068587.5-201ENST00000528506 175 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 LSM3P2-201ENST00000551246 273 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 AC125611.2-201ENST00000551907 647 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 AC012417.1-201ENST00000582307 1039 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 BNIP3P30-201ENST00000601184 574 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 RMST_3.1-201ENST00000611651 109 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 AC093648.1-201ENST00000623546 606 ntBASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC85CA6NKD9 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 RNU6-629P-201ENST00000384061 103 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AL136116.1-201ENST00000403591 381 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AL359643.1-201ENST00000404109 423 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 RPL7AP73-201ENST00000413490 353 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 RPS29P4-201ENST00000414733 161 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 USP12PX-201ENST00000432383 1057 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 RPL19P16-201ENST00000433839 588 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AL138799.3-201ENST00000438968 350 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 MTND4P25-201ENST00000441039 533 ntBASIC4.95□□□□□ -1.62
CCDC85CA6NKD9 AL671855.1-201ENST00000446875 1203 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms