Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.29□□□□□ -1.88
TRIM49BA6NDI0 MIR3651-201ENST00000630427 90 ntBASIC3.29□□□□□ -1.88
TRIM49BA6NDI0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM49BA6NDI0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRIM49BA6NDI0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.29□□□□□ -1.88
TRIM49BA6NDI0 ZNF826P-207ENST00000622273 1910 ntBASIC3.29□□□□□ -1.88
TRIM49BA6NDI0 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 Z99496.1-201ENST00000469424 1477 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC104454.1-201ENST00000421341 1401 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 EI24P2-201ENST00000397776 1076 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 U3.42-201ENST00000408746 214 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC009518.2-201ENST00000418056 731 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 DPRXP1-201ENST00000426312 460 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AL008629.1-201ENST00000438615 184 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 MTND3P1-201ENST00000441336 220 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AL133217.1-201ENST00000450980 425 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AL445669.2-201ENST00000454425 421 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 RNU7-125P-201ENST00000458760 62 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC108734.3-201ENST00000481241 1165 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 RPS3AP22-201ENST00000488297 769 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 OR4G11P-201ENST00000492842 939 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 IGHV3-76-201ENST00000522465 295 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 OSBPL9P5-201ENST00000542581 171 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC023050.2-201ENST00000544968 387 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AP005205.1-201ENST00000563503 508 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 MIR5004-201ENST00000579078 107 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC022662.1-201ENST00000580252 331 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC083760.1-201ENST00000589621 670 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 VN1R90P-201ENST00000595717 726 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC069545.1-201ENST00000605671 358 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC107294.3-201ENST00000609211 526 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AL360219.1-201ENST00000610230 366 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC022509.4-201ENST00000621404 572 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AP002782.1-201ENST00000623107 614 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC007490.1-201ENST00000624321 703 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC009039.2-201ENST00000624524 529 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TRIM49BA6NDI0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.89
TRIM49BA6NDI0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
TRIM49BA6NDI0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC090740.1-201ENST00000623193 2262 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AL354719.1-201ENST00000406535 843 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AL450338.1-201ENST00000407987 512 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC107081.1-201ENST00000414975 361 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 MRPS36P1-201ENST00000421291 307 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC233728.2-201ENST00000425348 757 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC091390.3-201ENST00000426478 338 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AL445567.1-201ENST00000439121 144 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 RPL36AP33-201ENST00000450395 310 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 ATG12P2-201ENST00000456830 416 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC092757.1-201ENST00000467293 467 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 RPS29P2-201ENST00000479278 136 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 RPL32P34-201ENST00000486380 400 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 RPL7P23-201ENST00000493874 747 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 MTCYBP16-201ENST00000509187 1129 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 RNU6-1225P-201ENST00000516336 65 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 SNORD59.2-201ENST00000516873 68 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 NBEAP1-201ENST00000554452 979 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC004223.2-201ENST00000590309 544 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 BNIP3P24-201ENST00000593398 557 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC015871.2-201ENST00000603605 948 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AL607023.1-201ENST00000620045 248 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 MIR1322-201ENST00000638013 71 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC008264.2-201ENST00000610193 3731 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms