Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC78A2IDD5 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC78A2IDD5 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 MTND5P17-201ENST00000418405 1603 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 OR5J1P-201ENST00000313544 939 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 RNU6-263P-201ENST00000363811 107 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 RHOT1P2-201ENST00000366423 333 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC006548.1-201ENST00000427470 102 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AL356010.1-201ENST00000456364 102 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC011276.1-201ENST00000469688 323 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 RPL39P36-201ENST00000490784 156 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 MTCO2P30-201ENST00000503662 364 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC093840.1-201ENST00000511599 336 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC010486.1-201ENST00000511793 424 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 RNA5SP519-201ENST00000516480 119 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 SNORD60.2-201ENST00000516883 86 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC090572.1-201ENST00000519251 160 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AP003385.6-201ENST00000531603 374 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC135001.1-201ENST00000544546 283 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC007424.1-203ENST00000554613 687 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AL035413.2-201ENST00000604801 525 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC068831.8-201ENST00000620171 435 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC011944.2-201ENST00000624440 683 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 CR381572.1-201ENST00000625098 102 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 AC140479.6-201ENST00000633535 357 ntBASIC4.29□□□□□ -1.72
CCDC78A2IDD5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC78A2IDD5 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AC092326.2-201ENST00000624772 1561 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 Y_RNA.166-201ENST00000363730 102 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 SNORA69-201ENST00000383895 132 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 RNU6-606P-201ENST00000384721 111 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 MIR3074-201ENST00000384885 81 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 MIR513A2-201ENST00000385249 127 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 RPS20P15-201ENST00000412792 311 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 RPL36AP36-201ENST00000418616 301 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 MTND1P14-201ENST00000427400 950 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 GTF2IP20-201ENST00000431663 360 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AC016691.1-201ENST00000441321 413 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AC140076.1-201ENST00000449897 361 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AC092001.1-201ENST00000453012 261 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 SNORD121B-201ENST00000458838 81 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 RPS20P20-201ENST00000460498 340 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 RPS29P19-201ENST00000479709 171 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AF213884.1-201ENST00000488102 463 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AC104164.2-201ENST00000496953 495 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 FGF7P4-201ENST00000509595 295 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 IFITM8P-201ENST00000522529 394 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AC011979.2-201ENST00000527568 352 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 OR4R1P-201ENST00000529879 463 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 OR5BN1P-201ENST00000532955 829 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 TOMM20P2-201ENST00000540082 421 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AC006064.5-201ENST00000541782 248 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AL138976.2-201ENST00000563989 694 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 CYP4A43P-201ENST00000568156 121 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AC105224.1-201ENST00000587055 421 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AC025449.1-201ENST00000603896 529 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AC013553.2-201ENST00000604244 589 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AL031666.3-201ENST00000609320 1006 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AC130324.3-201ENST00000614165 542 ntBASIC4.28□□□□□ -1.72
CCDC78A2IDD5 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms