Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 NEAT1-202ENST00000501122 22743 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 SMG1P4-204ENST00000523028 4131 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AC007685.1-201ENST00000329806 452 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 RNA5SP502-201ENST00000362694 119 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 RNU5A-1-201ENST00000362698 116 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 SNORA51.2-201ENST00000364595 132 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 Y_RNA.373-201ENST00000365600 103 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 SNORA37-201ENST00000384504 129 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 MIR3074-201ENST00000384885 81 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AL590762.2-201ENST00000395798 571 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 SOD2P1-201ENST00000396543 562 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 RPL30P2-201ENST00000414021 291 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 OR6C66P-201ENST00000414917 930 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 MTATP6P4-201ENST00000427725 675 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 RPL26P6-201ENST00000440913 438 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 NUTF2P3-201ENST00000448540 384 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AC079804.1-201ENST00000461922 436 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AC092451.1-201ENST00000480211 153 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AC073073.1-201ENST00000493920 463 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 RPL38P4-201ENST00000502376 214 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 RBBP4P6-201ENST00000508098 202 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 OR5D17P-201ENST00000531492 978 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AC243972.3-201ENST00000539655 198 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AC023050.3-201ENST00000541142 333 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AL352979.3-201ENST00000553515 247 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AC012182.1-201ENST00000570133 895 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AC005951.2-201ENST00000576282 495 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AC006116.10-201ENST00000591836 581 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 RNF138P2-201ENST00000603490 592 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AL158196.1-201ENST00000616786 434 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AC007998.5-201ENST00000622938 237 ntBASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC163A0A0D9SF12 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-288P-201ENST00000363690 104 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 Y_RNA.279-201ENST00000364763 95 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-116P-201ENST00000384042 109 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-767P-201ENST00000384132 107 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 MIR23B-201ENST00000384832 97 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC097374.1-203ENST00000400783 485 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 GPS2P1-201ENST00000411761 986 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC011933.1-201ENST00000413334 321 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC009161.1-201ENST00000417306 376 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 RPL35AP12-201ENST00000425362 338 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC011998.1-201ENST00000433403 117 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 RPL36AP6-201ENST00000435770 321 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 RPL7P12-201ENST00000446719 750 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC116533.1-201ENST00000459748 321 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 RPL7P19-201ENST00000469948 618 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC022795.1-201ENST00000473808 480 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AL049874.1-201ENST00000489560 388 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC106872.2-201ENST00000494303 480 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-123P-201ENST00000516163 102 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-1038P-201ENST00000516516 104 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 BTF3P12-201ENST00000519620 469 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AP005435.4-201ENST00000529514 284 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 SNRPGP16-201ENST00000533275 226 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 MIR4472-2-201ENST00000582069 67 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 FGF7P1-201ENST00000582820 288 ntBASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC163A0A0D9SF12 AC007687.1-201ENST00000602704 304 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms