Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 COX6CP5-201ENST00000527162 228 ntBASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 AC121758.2-201ENST00000553271 193 ntBASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 COX6CP3-201ENST00000580869 223 ntBASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 AP004247.3-201ENST00000608682 624 ntBASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 AC009570.1-201ENST00000609599 745 ntBASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 AC099654.7-201ENST00000635788 2127 ntBASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 MTCO1P9-201ENST00000505577 1534 ntBASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 MIR627-201ENST00000384979 97 ntBASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 AL121972.1-201ENST00000402023 252 ntBASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 snoU13.4-201ENST00000458916 104 ntBASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 SETP11-201ENST00000473027 690 ntBASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 AC090543.1-201ENST00000492168 485 ntBASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 ATP5F1P5-201ENST00000526403 760 ntBASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 AC110588.1-201ENST00000559699 137 ntBASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 ISCA1P3-201ENST00000577104 373 ntBASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 GLUD1P4-201ENST00000590914 418 ntBASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 AL138880.2-201ENST00000616214 239 ntBASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 U6.48-201ENST00000618523 106 ntBASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 AC018755.4-201ENST00000619715 454 ntBASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 YWHAEP7-203ENST00000622054 312 ntBASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
TRAV17A0A0B4J275 AC012321.1-201ENST00000561622 1588 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 RNA5SP252-201ENST00000391131 119 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 SNORA40.18-201ENST00000391200 128 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 SFR1P1-201ENST00000403720 688 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 MIR1250-201ENST00000408098 113 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 MORF4L1P7-201ENST00000426038 703 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 AL603825.1-201ENST00000438481 80 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 AL591719.1-201ENST00000444669 744 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 TPTE2P6-202ENST00000445572 1007 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 AC011753.1-201ENST00000451001 220 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 RBM43P1-201ENST00000476891 1081 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 AC104435.1-201ENST00000483483 166 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 AC008562.1-201ENST00000521763 330 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 ERHP1-201ENST00000523006 310 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 RPAP2P1-201ENST00000603626 1168 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 AL391813.2-201ENST00000609113 322 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 AP001521.1-201ENST00000609150 300 ntBASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV17A0A0B4J275 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.13
TRAV17A0A0B4J275 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 RNU6-1243P-201ENST00000364028 107 ntBASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 RNU6-452P-201ENST00000384406 107 ntBASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 AF274854.1-201ENST00000413236 615 ntBASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 AL392003.1-201ENST00000434394 243 ntBASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 AC104564.1-201ENST00000493028 407 ntBASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 FAM92A1P1-201ENST00000528023 890 ntBASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 MIR5002-201ENST00000584713 97 ntBASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 AC009314.1-201ENST00000603871 304 ntBASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 AP004372.1-201ENST00000604842 844 ntBASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 AC135803.1-201ENST00000608748 565 ntBASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 VN1R74P-201ENST00000613259 503 ntBASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
TRAV17A0A0B4J275 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms