Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AC103881.1-201ENST00000603476 538 ntBASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AC239803.2-201ENST00000610161 430 ntBASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 uc_338.5-201ENST00000611839 155 ntBASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 AC018755.4-201ENST00000619715 454 ntBASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TRAV1-2A0A0B4J238 RNA5SP387-201ENST00000364226 106 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 AL121972.1-201ENST00000402023 252 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 Z98742.3-201ENST00000418637 326 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 BTF3P9-201ENST00000418784 283 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 RPL31P63-201ENST00000422565 375 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 RPL7P54-201ENST00000438336 674 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 HMGB1P26-201ENST00000452520 628 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 RNA5SP310-201ENST00000459084 116 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 AC008427.1-201ENST00000503102 655 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 AC103783.1-201ENST00000520506 373 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 AC107954.1-201ENST00000565906 727 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 AC090616.3-201ENST00000582184 217 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 AC090312.2-201ENST00000582687 378 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 AC013444.2-201ENST00000603317 787 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 AC245884.12-201ENST00000615364 59 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 MIR6076-201ENST00000617521 113 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 AL356118.1-201ENST00000635272 1078 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 ZNF519P1-201ENST00000449011 1626 ntBASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV1-2A0A0B4J238 AP006437.1-201ENST00000641440 3685 ntBASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 RNA5SP139-201ENST00000364340 117 ntBASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 Z92545.1-201ENST00000411782 234 ntBASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 ANXA2P1-201ENST00000505539 926 ntBASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 AC004062.1-201ENST00000509926 645 ntBASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 AC108120.2-201ENST00000512973 294 ntBASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 AC087276.1-201ENST00000529659 480 ntBASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 AC110588.1-201ENST00000559699 137 ntBASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 AC005021.1-201ENST00000608730 355 ntBASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 AC020658.4-201ENST00000613987 684 ntBASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 AC098679.5-201ENST00000624394 571 ntBASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV1-2A0A0B4J238 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 MTND5P29-201ENST00000458676 1807 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 RNU6-1072P-201ENST00000384703 107 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 RNU6-443P-201ENST00000384780 107 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 MCTS2P-201ENST00000394552 546 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 MIR1250-201ENST00000408098 113 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 NPM1P11-201ENST00000417106 855 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 AL139415.2-201ENST00000431968 163 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 AC010881.1-201ENST00000433830 235 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 MTCYBP12-201ENST00000440559 1134 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 OR10R1P-201ENST00000441524 1141 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 RPS26P30-201ENST00000443431 335 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 FAM103A2P-201ENST00000444122 354 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 AC104689.1-201ENST00000473356 768 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 AC017007.3-201ENST00000479865 435 ntBASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV1-2A0A0B4J238 ZNF92P3-201ENST00000596594 954 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms