Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 RNU6-525P-201ENST00000363685 104 ntBASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 RNU6-263P-201ENST00000363811 107 ntBASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 U3.29-201ENST00000391296 212 ntBASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 RPL31P63-201ENST00000422565 375 ntBASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 AC004022.1-201ENST00000447766 1066 ntBASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 AC105252.1-201ENST00000503089 286 ntBASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 MRPS17P9-201ENST00000511924 393 ntBASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 ATP5F1P5-201ENST00000526403 760 ntBASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 AC087276.1-201ENST00000529659 480 ntBASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 AC079089.3-201ENST00000603094 673 ntBASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 AL449363.1-201ENST00000617815 186 ntBASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 SDAD1P2-201ENST00000441308 2028 ntBASIC1.62□□□□□ -2.15
TRAV30A0A087WSZ9 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 RNU6-234P-201ENST00000365229 104 ntBASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AL591719.1-201ENST00000444669 744 ntBASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AL359385.1-201ENST00000456509 365 ntBASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 HSPE1P6-201ENST00000479457 291 ntBASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AC096571.1-202ENST00000506634 735 ntBASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AC006499.2-201ENST00000513470 337 ntBASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AC022662.1-201ENST00000580252 331 ntBASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 MIR3609-201ENST00000582661 80 ntBASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 XIAPP1-201ENST00000603162 600 ntBASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AC106900.2-201ENST00000604994 317 ntBASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AP005137.2-201ENST00000609238 400 ntBASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 AL161423.1-201ENST00000613700 262 ntBASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 MTND4P31-201ENST00000425607 1343 ntBASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 NSRP1P1-201ENST00000444067 1693 ntBASIC1.61□□□□□ -2.15
TRAV30A0A087WSZ9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 RNA5SP289-201ENST00000362332 137 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 U3.20-201ENST00000390909 217 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 RNU4-78P-201ENST00000410940 126 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 RPL17P12-201ENST00000413391 526 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 SEPT2P1-201ENST00000419651 180 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 HMGB1P48-201ENST00000446155 598 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 HMGB1P26-201ENST00000452520 628 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 ATG12P2-201ENST00000456830 416 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 SNORA31.23-201ENST00000517219 133 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 SNRPGP16-201ENST00000533275 226 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 AC074050.1-201ENST00000563247 211 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 AC079395.3-201ENST00000615161 484 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 AC097372.4-201ENST00000625025 466 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 CCT4P2-201ENST00000233836 1548 ntBASIC1.6□□□□□ -2.15
TRAV30A0A087WSZ9 MTND4P27-201ENST00000450813 1354 ntBASIC1.59□□□□□ -2.15
TRAV30A0A087WSZ9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
TRAV30A0A087WSZ9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV30A0A087WSZ9 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
TRAV30A0A087WSZ9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV30A0A087WSZ9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.15
TRAV30A0A087WSZ9 GSTA9P-201ENST00000406231 611 ntBASIC1.59□□□□□ -2.15
TRAV30A0A087WSZ9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.59□□□□□ -2.15
TRAV30A0A087WSZ9 AL365496.1-201ENST00000426885 215 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms