Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AC068792.1-201ENST00000621354 417 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AL590240.3-201ENST00000621416 943 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AL445264.1-201ENST00000621719 171 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AL603839.4-201ENST00000624658 1005 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
SNX9Q9Y5X1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 RIOK3P1-201ENST00000418778 1528 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 RNU6-730P-201ENST00000383954 104 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 RNU6-769P-201ENST00000384407 104 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 MIR7-3-201ENST00000384898 110 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 SSXP10-201ENST00000402595 565 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC006989.1-201ENST00000427212 131 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 RPL23AP74-201ENST00000437246 471 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 RSU1P2-202ENST00000437884 485 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 U3.44-201ENST00000458938 192 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC004801.2-202ENST00000463559 283 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC023598.1-201ENST00000472521 361 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC011825.1-201ENST00000484967 388 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC021678.1-201ENST00000505195 936 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 POU5F1P7-201ENST00000508759 541 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 FABP5P5-201ENST00000515537 406 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC025881.1-201ENST00000518851 512 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AP002748.2-201ENST00000528671 348 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 OR5AP1P-201ENST00000529730 940 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 BNIP3P33-201ENST00000598912 569 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC079089.3-201ENST00000603094 673 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC006254.3-201ENST00000603353 884 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC112187.2-201ENST00000604345 283 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC090186.1-201ENST00000605991 572 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC080013.4-201ENST00000607624 649 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC006023.2-201ENST00000609916 167 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC019176.2-201ENST00000611579 315 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC005332.10-201ENST00000612725 619 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC026585.1-201ENST00000619582 524 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC012314.7-201ENST00000619693 93 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC099842.1-201ENST00000619919 596 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC244100.1-202ENST00000621554 382 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 CYP3A51P-201ENST00000633513 256 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AP001148.1-201ENST00000624124 2359 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 AC006378.2-201ENST00000623178 2476 ntBASIC3.77□□□□□ -1.81
SNX9Q9Y5X1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AL359893.1-201ENST00000447628 1580 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 MTCO1P12-201ENST00000414273 1543 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 TEX21P-201ENST00000447107 1476 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 Y_RNA.41-201ENST00000362646 102 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 RNU6-283P-201ENST00000364788 107 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 RNU6-297P-201ENST00000384636 107 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AL391417.1-201ENST00000404100 426 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 MIR1305-201ENST00000408300 86 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC007899.1-201ENST00000412776 775 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 RPL17P12-201ENST00000413391 526 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC109780.2-201ENST00000413467 845 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC109583.1-201ENST00000432156 268 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 SNRPEP7-201ENST00000438350 220 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 MTND1P34-201ENST00000438556 671 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms