Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 NUP58P1-201ENST00000502546 1738 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 RNY4P34-201ENST00000364779 95 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 SOD2P1-201ENST00000396543 562 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 RNU2-15P-201ENST00000410692 191 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AL158156.1-201ENST00000422509 473 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 BX890604.2-201ENST00000427883 474 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 ARPC3P1-201ENST00000437218 533 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 RPL7P28-201ENST00000437739 740 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AC127537.2-201ENST00000439258 465 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 FAM103A2P-201ENST00000444122 354 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 NANOGNBP1-201ENST00000448444 480 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AC006480.1-201ENST00000449887 378 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AC104619.4-201ENST00000510773 249 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 SNORD116-26-201ENST00000516006 96 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 RNU6-1003P-201ENST00000517099 105 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AC006960.3-201ENST00000561845 705 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AL157394.1-201ENST00000562983 1224 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AC087481.2-201ENST00000565492 330 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 MIR4801-201ENST00000582704 82 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 BRDTP1-201ENST00000605735 677 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AC107294.1-201ENST00000609524 467 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 MIR6715A-201ENST00000615929 79 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AC073534.2-201ENST00000620377 381 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AC138649.3-201ENST00000622154 254 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AC095031.1-201ENST00000623685 672 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 AC091905.1-201ENST00000624400 311 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 ZNF734P-201ENST00000419494 1534 ntBASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.79□□□□□ -1.8
RAI2Q9Y5P3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AC092447.10-201ENST00000620607 1652 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 RNU6-343P-201ENST00000364709 104 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 Y_RNA.296-201ENST00000364930 108 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 RNA5SP424-201ENST00000390988 115 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 RPS3AP36-201ENST00000398190 775 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 MRPL42P2-201ENST00000403169 426 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AL035423.1-201ENST00000420331 213 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 EIF1P1-201ENST00000421436 341 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 ISCA1P1-201ENST00000426679 387 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AL031667.1-201ENST00000440222 725 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AL133162.1-201ENST00000463228 453 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AC126182.1-201ENST00000478134 357 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AC105252.1-201ENST00000503089 286 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 RNU6-506P-201ENST00000516553 94 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AP003467.2-201ENST00000520175 319 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 MIR3913-1-201ENST00000577744 102 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 MIR5187-201ENST00000583479 76 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AC011468.4-201ENST00000603942 409 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AL137843.1-201ENST00000605078 385 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AC126118.1-201ENST00000607744 628 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 AC010149.2-201ENST00000637608 315 ntBASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.78□□□□□ -1.8
RAI2Q9Y5P3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms