Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC068305.1-201ENST00000497406 726 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AC126177.3-201ENST00000551839 688 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AC002553.4-201ENST00000616896 331 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 U6.42-201ENST00000618440 107 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AC103858.2-201ENST00000621471 543 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AC019226.1-201ENST00000625666 515 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AL136964.1-201ENST00000622038 2990 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 RNU6-511P-201ENST00000363496 107 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 RNU1-32P-201ENST00000363937 159 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 RNU6-1322P-201ENST00000364309 107 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AL109755.1-201ENST00000401791 649 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 RN7SKP285-201ENST00000410137 318 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AC244098.2-201ENST00000422068 99 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 MTCO3P18-201ENST00000440206 761 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AC140076.1-201ENST00000449897 361 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 snoU13.1-201ENST00000459157 104 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AC099522.1-202ENST00000514718 367 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 RNU2-10P-201ENST00000516375 211 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 SCARNA24.1-201ENST00000516465 137 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AC104383.1-201ENST00000530297 370 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AL121603.1-201ENST00000553815 142 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AC022968.1-201ENST00000567372 442 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AC008745.1-201ENST00000604064 271 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AC010680.3-201ENST00000604215 520 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.28□□□□□ -1.72
PCDHA3Q9Y5H8 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC116667.1-201ENST00000604855 2072 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 SNORD56.2-201ENST00000363242 71 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 RNU4-65P-201ENST00000410473 140 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 USP9YP6-201ENST00000413550 854 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 USP9YP27-201ENST00000418455 438 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 MTCO1P20-201ENST00000425366 358 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 ELOCP14-201ENST00000428070 331 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 ATP5HP2-201ENST00000433885 485 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 ELOCP7-201ENST00000439968 331 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC005094.1-201ENST00000440420 368 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 NDUFS5P3-201ENST00000450668 321 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC027673.1-201ENST00000456245 405 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 RPL36AP51-201ENST00000487216 318 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 FCF1P3-201ENST00000496394 590 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 RNU6-410P-201ENST00000517006 107 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC128657.1-201ENST00000549459 145 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC107016.1-201ENST00000550463 337 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 TVP23BP1-201ENST00000557500 617 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC098848.2-201ENST00000588023 330 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 GLUD1P4-201ENST00000590914 418 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC068790.4-201ENST00000602474 263 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AC025449.1-201ENST00000603896 529 ntBASIC4.27□□□□□ -1.73
PCDHA3Q9Y5H8 AP000907.4-201ENST00000604143 237 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms