Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL136221.1-201ENST00000621449 509 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AC010338.1-201ENST00000621823 717 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 AC138649.5-201ENST00000637456 137 ntBASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CTDP1Q9Y5B0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 RNU6-744P-201ENST00000365557 107 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 XGY1-201ENST00000381172 446 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AL359837.1-201ENST00000381357 287 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 SNORA51.6-201ENST00000384151 125 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 RNU6-1316P-201ENST00000384242 108 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 snosnR66.1-201ENST00000391095 99 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AC016769.3-201ENST00000396562 315 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 RPL36AP36-201ENST00000418616 301 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 RPL36P19-201ENST00000430744 301 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 RPL7P15-201ENST00000461190 712 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AC079382.1-201ENST00000493346 557 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AC034222.1-201ENST00000494052 532 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AC104164.2-201ENST00000496953 495 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 Vault.3-201ENST00000516676 95 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 RNU6-201P-201ENST00000517100 61 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 SUB1P2-201ENST00000556401 297 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AC034105.4-201ENST00000568304 277 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AC099489.2-201ENST00000574976 260 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AC006270.2-201ENST00000578523 652 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AL162413.1-201ENST00000603198 110 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AC093788.1-201ENST00000609356 927 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AC015813.4-201ENST00000610469 179 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AC005086.4-201ENST00000623065 213 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 AC116667.1-201ENST00000604855 2072 ntBASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.8□□□□□ -1.64
CTDP1Q9Y5B0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AC068254.2-201ENST00000623938 3577 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AL049780.3-201ENST00000624612 1583 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 SNORA62.3-201ENST00000365110 153 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 MIR23B-201ENST00000384832 97 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 RNU4-6P-201ENST00000410804 122 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 HSPE1P12-201ENST00000412576 301 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AC096632.1-201ENST00000427395 310 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 RPL7P54-201ENST00000438336 674 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 CALM1P1-201ENST00000442082 433 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AC079804.1-201ENST00000461922 436 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 VN1R105P-201ENST00000486595 910 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AC120057.2-201ENST00000571520 271 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AC005261.5-201ENST00000596280 355 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AC025946.2-201ENST00000603398 234 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AC007621.1-201ENST00000604544 437 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 BNIP3P10-201ENST00000605360 577 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 OR10AB1P-201ENST00000609613 938 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AC140113.4-201ENST00000622087 222 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AC008785.1-201ENST00000624475 456 ntBASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTDP1Q9Y5B0 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTDP1Q9Y5B0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTDP1Q9Y5B0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CTDP1Q9Y5B0 SNORA60-201ENST00000362396 134 ntBASIC4.78□□□□□ -1.64
CTDP1Q9Y5B0 RNU6-853P-201ENST00000364306 107 ntBASIC4.78□□□□□ -1.64
CTDP1Q9Y5B0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTDP1Q9Y5B0 RNU6-116P-201ENST00000384042 109 ntBASIC4.78□□□□□ -1.64
CTDP1Q9Y5B0 Y_RNA.535-201ENST00000384612 99 ntBASIC4.78□□□□□ -1.64
CTDP1Q9Y5B0 MIR195-201ENST00000385194 87 ntBASIC4.78□□□□□ -1.64
CTDP1Q9Y5B0 RPL23AP32-201ENST00000395315 459 ntBASIC4.78□□□□□ -1.64
CTDP1Q9Y5B0 RAC1P3-201ENST00000416129 580 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms