Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 SCARNA15.2-201ENST00000516409 127 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 RNU6-1261P-201ENST00000517194 104 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AC009812.2-201ENST00000517657 457 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 SUB1P1-201ENST00000524415 382 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 PSMA2P1-201ENST00000526365 646 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AC010546.1-201ENST00000569391 485 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AL592148.2-201ENST00000612210 372 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AL020991.1-201ENST00000612314 373 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AC078880.5-201ENST00000617845 421 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AL355493.4-201ENST00000618530 292 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AC087821.2-201ENST00000637086 450 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AL049641.1-201ENST00000441055 1948 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 RPL9P7-201ENST00000330965 580 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 RNU6-270P-201ENST00000364131 105 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 HMGN2P35-201ENST00000412164 270 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 Z85995.1-201ENST00000415547 335 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AC007742.1-201ENST00000425789 329 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AC098614.2-201ENST00000426040 255 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 UBE2D3P3-201ENST00000426992 425 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AL590233.1-201ENST00000430017 456 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AL512844.2-201ENST00000433990 593 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 ELOCP26-201ENST00000436067 329 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 COX6CP18-201ENST00000448769 222 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AL162389.1-201ENST00000449233 177 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 RPS15AP17-201ENST00000470598 390 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AC103975.1-201ENST00000482506 483 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AC147055.4-201ENST00000504399 745 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 GTF2IP8-201ENST00000560687 584 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AC138761.3-201ENST00000579993 334 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 MIR3944-201ENST00000581277 108 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 NRBF2P5-201ENST00000603087 788 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 BNIP3P11-201ENST00000603878 563 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AC004853.1-201ENST00000604902 698 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AC090115.4-201ENST00000609970 188 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AL392048.1-201ENST00000613946 534 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AC034102.8-201ENST00000615146 484 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AC140725.3-201ENST00000616193 880 ntBASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.53□□□□□ -2
RHBDD3Q9Y3P4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC005539.1-201ENST00000443768 1479 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 RNU5B-1-201ENST00000363286 116 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 MIR181A2-201ENST00000384863 110 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AL513475.1-201ENST00000406602 315 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC009414.1-201ENST00000427200 443 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AL512649.1-201ENST00000428997 581 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC093156.1-201ENST00000440382 670 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 RPL39P6-201ENST00000448289 150 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC104978.1-201ENST00000449387 391 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC126182.1-201ENST00000478134 357 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 RPL9P33-201ENST00000484311 566 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC090453.1-201ENST00000495560 436 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AIG1P1-201ENST00000503376 148 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 RNU6-928P-201ENST00000516876 104 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC124947.2-202ENST00000552735 133 ntBASIC2.52□□□□□ -2.01
RHBDD3Q9Y3P4 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms