Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 BX119904.4-201ENST00000424402 301 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 NOTCH2P1-201ENST00000443481 624 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AP004217.1-201ENST00000480579 346 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 FAM172BP-201ENST00000487497 1089 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AC026979.1-201ENST00000492525 396 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 SCARNA15.2-201ENST00000516409 127 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AL132857.1-201ENST00000555180 708 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AMZ2P1-203ENST00000565833 850 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 MIR4509-3-201ENST00000578671 94 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 MIR4509-2-201ENST00000583920 94 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AL391834.2-201ENST00000609982 546 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 MIR4509-1-201ENST00000618224 94 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AC022306.3-201ENST00000619930 550 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 Z99129.2-201ENST00000619967 314 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AL161637.1-201ENST00000622380 412 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AP000526.1-201ENST00000603308 1388 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC006378.2-201ENST00000623178 2476 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 RNU6-97P-201ENST00000363387 104 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 RNU4-92P-201ENST00000363783 136 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC068538.1-201ENST00000376856 336 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 RNU6-1207P-201ENST00000384343 107 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 TPMTP3-201ENST00000411928 735 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 HMGN2P35-201ENST00000412164 270 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 RPL36AP36-201ENST00000418616 301 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC018630.2-202ENST00000422992 927 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AL590383.1-201ENST00000428602 75 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 ZYG11AP1-201ENST00000430329 837 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC108734.1-201ENST00000439549 399 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC092641.1-201ENST00000440229 772 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 Z96811.1-201ENST00000445880 108 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 MTND1P9-201ENST00000453775 944 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 RNU6-420P-201ENST00000458780 107 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 RPL23AP11-201ENST00000475260 469 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC104563.1-201ENST00000476147 376 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC021382.1-201ENST00000483523 359 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC116353.3-201ENST00000511215 249 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC010374.2-201ENST00000512933 535 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC007224.1-201ENST00000564410 144 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC006504.3-201ENST00000586818 523 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC006270.3-201ENST00000605967 1036 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AL157392.4-201ENST00000609756 345 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC024941.1-201ENST00000612250 334 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 SNHG22-203ENST00000617833 660 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC006386.1-201ENST00000619436 415 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AL159972.1-201ENST00000625150 448 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 AC092447.10-201ENST00000620607 1652 ntBASIC2.57□□□□□ -2
KCNIP3Q9Y2W7 OR4G2P-202ENST00000641004 1759 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 RPL32P3-201ENST00000359025 275 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 RNU6-1078P-201ENST00000364522 103 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 BX682237.1-201ENST00000415016 335 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms