Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
SCN11AQ9UI33 RPL23AP47-201ENST00000408017 460 ntBASIC2.22□□□□□ -2.05
SCN11AQ9UI33 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.22□□□□□ -2.05
SCN11AQ9UI33 HSPE1P1-201ENST00000421494 318 ntBASIC2.22□□□□□ -2.05
SCN11AQ9UI33 XKRYP6-201ENST00000440468 1116 ntBASIC2.22□□□□□ -2.05
SCN11AQ9UI33 XKRYP3-201ENST00000442113 1116 ntBASIC2.22□□□□□ -2.05
SCN11AQ9UI33 AMD1P1-201ENST00000457220 922 ntBASIC2.22□□□□□ -2.05
SCN11AQ9UI33 RPL5P13-201ENST00000462840 709 ntBASIC2.22□□□□□ -2.05
SCN11AQ9UI33 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.22□□□□□ -2.05
SCN11AQ9UI33 FABP5P6-201ENST00000510588 409 ntBASIC2.22□□□□□ -2.05
SCN11AQ9UI33 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.22□□□□□ -2.05
SCN11AQ9UI33 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.22□□□□□ -2.05
SCN11AQ9UI33 SYF2P1-201ENST00000550658 413 ntBASIC2.22□□□□□ -2.05
SCN11AQ9UI33 YWHAQP7-201ENST00000603536 658 ntBASIC2.22□□□□□ -2.05
SCN11AQ9UI33 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SCN11AQ9UI33 MTND4P23-201ENST00000447723 1363 ntBASIC2.22□□□□□ -2.05
SCN11AQ9UI33 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 RNU1-57P-201ENST00000384491 166 ntBASIC2.21□□□□□ -2.06
SCN11AQ9UI33 AL121972.1-201ENST00000402023 252 ntBASIC2.21□□□□□ -2.06
SCN11AQ9UI33 RNA5SP492-201ENST00000411330 114 ntBASIC2.21□□□□□ -2.06
SCN11AQ9UI33 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 DNAJC19P4-201ENST00000440115 345 ntBASIC2.21□□□□□ -2.06
SCN11AQ9UI33 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 RPS29P12-201ENST00000460178 152 ntBASIC2.21□□□□□ -2.06
SCN11AQ9UI33 AP000790.1-201ENST00000528891 737 ntBASIC2.21□□□□□ -2.06
SCN11AQ9UI33 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 HMGN2P28-201ENST00000606102 262 ntBASIC2.21□□□□□ -2.06
SCN11AQ9UI33 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 HMGN2P21-201ENST00000447764 270 ntBASIC2.21□□□□□ -2.06
SCN11AQ9UI33 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 USP9YP10-201ENST00000454868 628 ntBASIC2.21□□□□□ -2.06
SCN11AQ9UI33 BX322784.1-201ENST00000455793 1077 ntBASIC2.21□□□□□ -2.06
SCN11AQ9UI33 AC005912.1-201ENST00000495392 255 ntBASIC2.21□□□□□ -2.06
SCN11AQ9UI33 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 RAC1P5-201ENST00000512182 576 ntBASIC2.21□□□□□ -2.06
SCN11AQ9UI33 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 MIR502-201ENST00000606349 86 ntBASIC2.21□□□□□ -2.06
SCN11AQ9UI33 SNHG22-203ENST00000617833 660 ntBASIC2.21□□□□□ -2.06
SCN11AQ9UI33 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN11AQ9UI33 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SCN11AQ9UI33 RNA5SP393-201ENST00000363423 117 ntBASIC2.2□□□□□ -2.06
SCN11AQ9UI33 AC004965.1-201ENST00000413033 213 ntBASIC2.2□□□□□ -2.06
SCN11AQ9UI33 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.2□□□□□ -2.06
SCN11AQ9UI33 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.2□□□□□ -2.06
SCN11AQ9UI33 MIR8081-201ENST00000611533 95 ntBASIC2.2□□□□□ -2.06
SCN11AQ9UI33 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SCN11AQ9UI33 MIR6504-201ENST00000613520 61 ntBASIC2.2□□□□□ -2.06
SCN11AQ9UI33 FO624990.1-201ENST00000636373 85 ntBASIC2.2□□□□□ -2.06
SCN11AQ9UI33 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SCN11AQ9UI33 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SCN11AQ9UI33 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.19□□□□□ -2.06
SCN11AQ9UI33 RPL7P37-201ENST00000425095 738 ntBASIC2.19□□□□□ -2.06
SCN11AQ9UI33 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.19□□□□□ -2.06
SCN11AQ9UI33 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.19□□□□□ -2.06
SCN11AQ9UI33 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.19□□□□□ -2.06
SCN11AQ9UI33 PTP4A1P6-201ENST00000531034 478 ntBASIC2.19□□□□□ -2.06
SCN11AQ9UI33 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.19□□□□□ -2.06
SCN11AQ9UI33 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.19□□□□□ -2.06
SCN11AQ9UI33 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.19□□□□□ -2.06
SCN11AQ9UI33 AC113368.1-201ENST00000603736 382 ntBASIC2.19□□□□□ -2.06
SCN11AQ9UI33 AL035411.2-201ENST00000604022 421 ntBASIC2.19□□□□□ -2.06
SCN11AQ9UI33 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SCN11AQ9UI33 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SCN11AQ9UI33 AL157700.1-201ENST00000561973 1432 ntBASIC2.19□□□□□ -2.06
SCN11AQ9UI33 RNU4-13P-201ENST00000364019 141 ntBASIC2.18□□□□□ -2.06
SCN11AQ9UI33 RFESDP1-201ENST00000422350 461 ntBASIC2.18□□□□□ -2.06
SCN11AQ9UI33 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN11AQ9UI33 AC010683.1-201ENST00000473673 378 ntBASIC2.18□□□□□ -2.06
SCN11AQ9UI33 MTCYBP17-201ENST00000503579 789 ntBASIC2.18□□□□□ -2.06
SCN11AQ9UI33 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SCN11AQ9UI33 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.18□□□□□ -2.06
SCN11AQ9UI33 AC121761.2-201ENST00000617300 689 ntBASIC2.18□□□□□ -2.06
SCN11AQ9UI33 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.18□□□□□ -2.06
SCN11AQ9UI33 CR382285.2-201ENST00000624662 1495 ntBASIC2.18□□□□□ -2.06
SCN11AQ9UI33 AL590084.1-201ENST00000407885 387 ntBASIC2.18□□□□□ -2.06
SCN11AQ9UI33 AL451074.3-201ENST00000437709 472 ntBASIC2.18□□□□□ -2.06
SCN11AQ9UI33 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.18□□□□□ -2.06
SCN11AQ9UI33 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.18□□□□□ -2.06
SCN11AQ9UI33 AC104115.2-201ENST00000523026 687 ntBASIC2.18□□□□□ -2.06
SCN11AQ9UI33 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SCN11AQ9UI33 LINC00216-201ENST00000623548 1126 ntBASIC2.18□□□□□ -2.06
SCN11AQ9UI33 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SCN11AQ9UI33 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.17□□□□□ -2.06
SCN11AQ9UI33 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SCN11AQ9UI33 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.17□□□□□ -2.06
SCN11AQ9UI33 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.17□□□□□ -2.06
SCN11AQ9UI33 AL354943.1-201ENST00000572103 781 ntBASIC2.17□□□□□ -2.06
SCN11AQ9UI33 AC007620.3-201ENST00000608131 497 ntBASIC2.17□□□□□ -2.06
SCN11AQ9UI33 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.17□□□□□ -2.06
SCN11AQ9UI33 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.17□□□□□ -2.06
SCN11AQ9UI33 AP002907.1-201ENST00000606361 1430 ntBASIC2.17□□□□□ -2.06
SCN11AQ9UI33 TAS2R15P-201ENST00000390674 928 ntBASIC2.16□□□□□ -2.06
SCN11AQ9UI33 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms