Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RNU6-328P-201ENST00000390887 106 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AL021407.1-201ENST00000404531 386 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 RNA5SP129-201ENST00000410276 118 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 RN7SKP111-201ENST00000410349 271 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 RNA5SP293-201ENST00000410527 113 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AL390023.1-201ENST00000428836 262 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 ISCA1P2-201ENST00000438679 421 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 Z83846.1-201ENST00000446798 265 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 HMGB3P8-201ENST00000449709 577 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 HMGN2P16-201ENST00000456802 261 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 CEACAMP4-201ENST00000457676 421 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 MTCO2P32-201ENST00000514865 403 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 SNORA31.8-201ENST00000516327 108 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 IGKV2-23-201ENST00000518729 323 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AL450472.3-201ENST00000615578 367 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AC095031.1-201ENST00000623685 672 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AC073476.4-201ENST00000628409 72 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 AC244258.1-201ENST00000637553 1071 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 MTND5P33-201ENST00000571250 1450 ntBASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIMA1Q9UHB6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AL513185.3-201ENST00000433335 1300 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 RNY4P24-201ENST00000362735 96 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 RNU5F-7P-201ENST00000363696 115 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 RNU6-805P-201ENST00000365643 106 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 RNU6-637P-201ENST00000384050 107 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 RPS15AP6-201ENST00000420703 385 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 RPL7P2-201ENST00000427639 268 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AC024082.2-201ENST00000434771 238 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 RPL23AP22-201ENST00000437556 453 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 CYCSP43-201ENST00000438233 310 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 HMGB3P11-201ENST00000440127 604 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 NOTCH2P1-201ENST00000443481 624 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 MTND2P22-201ENST00000444325 1033 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 BMI1P1-201ENST00000445879 941 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 RPS27AP8-201ENST00000452665 445 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 MTCO1P42-201ENST00000457379 726 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AC103987.1-201ENST00000473394 348 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 HMGB3P15-201ENST00000507326 574 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 RNA5SP468-201ENST00000516782 93 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AC125611.2-201ENST00000551907 647 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 MED28P6-201ENST00000558776 231 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 TPMTP1-201ENST00000592307 737 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AC009268.2-201ENST00000621925 457 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 AC093591.3-201ENST00000634516 308 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 ZNF833P-201ENST00000424938 1494 ntBASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
LIMA1Q9UHB6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.71□□□□□ -1.82
LIMA1Q9UHB6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LIMA1Q9UHB6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LIMA1Q9UHB6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LIMA1Q9UHB6 DEFB109C-201ENST00000382575 264 ntBASIC3.71□□□□□ -1.82
LIMA1Q9UHB6 DEFB109B-201ENST00000382656 264 ntBASIC3.71□□□□□ -1.82
LIMA1Q9UHB6 RNU6-809P-201ENST00000384461 107 ntBASIC3.71□□□□□ -1.82
LIMA1Q9UHB6 MT-TH-201ENST00000387441 69 ntBASIC3.71□□□□□ -1.82
LIMA1Q9UHB6 MTCYBP36-201ENST00000404146 440 ntBASIC3.71□□□□□ -1.82
LIMA1Q9UHB6 RN7SKP263-201ENST00000411194 309 ntBASIC3.71□□□□□ -1.82
LIMA1Q9UHB6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.71□□□□□ -1.82
LIMA1Q9UHB6 MTATP6P4-201ENST00000427725 675 ntBASIC3.71□□□□□ -1.82
LIMA1Q9UHB6 SETP8-201ENST00000435341 628 ntBASIC3.71□□□□□ -1.82
LIMA1Q9UHB6 AC090774.1-201ENST00000435925 246 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms