Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 OR1AA1P-201ENST00000419597 916 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 AC244098.2-201ENST00000422068 99 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.26□□□□□ -1.73
COL20A1Q9P218 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.26□□□□□ -1.73
COL20A1Q9P218 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.26□□□□□ -1.73
COL20A1Q9P218 HMGN2P31-201ENST00000432430 273 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 AC119618.1-201ENST00000434191 222 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.26□□□□□ -1.73
COL20A1Q9P218 AL136380.1-201ENST00000447970 162 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.26□□□□□ -1.73
COL20A1Q9P218 AC106707.2-201ENST00000484182 374 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 RPL7P23-201ENST00000493874 747 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.26□□□□□ -1.73
COL20A1Q9P218 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.26□□□□□ -1.73
COL20A1Q9P218 AC091133.4-201ENST00000511142 308 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 AC010493.1-201ENST00000513479 292 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
COL20A1Q9P218 DEFB108A-201ENST00000530110 222 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 AC018630.1-201ENST00000541376 925 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 MIR3146-201ENST00000580367 79 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 MIR3118-1-201ENST00000581787 76 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.26□□□□□ -1.73
COL20A1Q9P218 AL137849.1-201ENST00000604767 169 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 HMGN2P28-201ENST00000606102 262 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 AL161734.1-201ENST00000609720 557 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 AC013476.2-201ENST00000614456 459 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL20A1Q9P218 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL20A1Q9P218 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL20A1Q9P218 AL365440.1-201ENST00000436135 2167 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL20A1Q9P218 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 AL138713.1-201ENST00000624026 2130 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL20A1Q9P218 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL20A1Q9P218 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 Y_RNA.516-201ENST00000384541 124 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 Y_RNA.548-201ENST00000384656 105 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 RNU6-278P-201ENST00000390945 109 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL20A1Q9P218 RNU2-62P-201ENST00000410868 191 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 RNU6-516P-201ENST00000411381 104 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC127391.1-201ENST00000411737 98 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 ATP5A1P2-201ENST00000412323 255 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 BX295541.1-201ENST00000417774 250 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC137499.1-201ENST00000427602 88 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 MTND3P21-201ENST00000433774 331 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 DNAJC19P4-201ENST00000440115 345 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC093156.1-201ENST00000440382 670 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 MTCO2P29-201ENST00000465212 189 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 Vault.3-201ENST00000516676 95 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 MTND1P5-201ENST00000517906 940 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 IGKV2D-19-201ENST00000523346 262 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC016957.1-201ENST00000534895 309 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC126177.3-201ENST00000551839 688 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 AP001094.1-201ENST00000579805 193 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 BNIP3P22-201ENST00000593399 556 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC012669.1-201ENST00000603209 283 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC007038.2-201ENST00000608095 740 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 AL133173.2-201ENST00000614270 90 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC136475.10-201ENST00000620253 385 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC091953.2-201ENST00000623979 160 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC068137.3-201ENST00000639191 341 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC073869.6-201ENST00000640656 341 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
COL20A1Q9P218 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL20A1Q9P218 IPO8P1-201ENST00000455509 3109 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 AC007390.2-201ENST00000606229 3803 ntBASIC4.25□□□□□ -1.73
COL20A1Q9P218 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL20A1Q9P218 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL20A1Q9P218 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 RNU6-1155P-201ENST00000363554 107 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 RNU5A-8P-201ENST00000364102 114 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL20A1Q9P218 RNU6-637P-201ENST00000384050 107 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 RNU6-517P-201ENST00000384362 110 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 USP9YP15-201ENST00000442391 422 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 NANOGNBP1-201ENST00000448444 480 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 AL451050.1-201ENST00000450126 415 ntBASIC4.24□□□□□ -1.73
COL20A1Q9P218 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.24□□□□□ -1.73
COL20A1Q9P218 MTND1P12-201ENST00000455231 147 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms