Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RPL7P36-201ENST00000444633 681 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 AL357552.1-201ENST00000445254 415 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 AP000542.1-201ENST00000448473 371 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 BX276092.4-201ENST00000452056 248 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 SNORD42A-201ENST00000459584 64 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 AL133162.1-201ENST00000463228 453 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 RPL23AP14-201ENST00000468281 468 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 SNRPGP3-201ENST00000469405 227 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 AC107401.1-201ENST00000503426 685 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 RNU2-27P-201ENST00000516185 142 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 RN7SKP234-201ENST00000517173 224 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 PAICSP4-201ENST00000517543 1253 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 AC024224.1-201ENST00000538284 609 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 AC009063.1-201ENST00000563342 702 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 AC106785.1-201ENST00000565935 262 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 MIR5187-201ENST00000583479 76 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 BNIP3P8-201ENST00000597863 560 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 AL445264.1-201ENST00000621719 171 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.67□□□□□ -1.82
SMARCAL1Q9NZC9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 RNU6-328P-201ENST00000390887 106 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AL356967.1-201ENST00000406305 431 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 MTCO1P17-201ENST00000411522 491 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 USP9YP13-201ENST00000417797 480 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 RPL36AP36-201ENST00000418616 301 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 PSMA6P3-201ENST00000428242 164 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 MTND1P4-201ENST00000435196 415 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 MTCYBP45-201ENST00000435243 565 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC244505.5-201ENST00000443639 207 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 NANOGNBP1-201ENST00000448444 480 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AL033528.1-201ENST00000453780 140 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 KLF3P2-201ENST00000465138 268 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 RPS4XP22-201ENST00000480755 780 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 RPL9P33-201ENST00000484311 566 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 NDUFB4P2-201ENST00000509515 391 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC109464.2-201ENST00000510242 943 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 PTGES3P3-201ENST00000511479 482 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AL390208.1-201ENST00000605885 644 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 AC004009.2-201ENST00000623016 728 ntBASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SMARCAL1Q9NZC9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SMARCAL1Q9NZC9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SMARCAL1Q9NZC9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 RNU6-744P-201ENST00000365557 107 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 RNU6-1042P-201ENST00000384204 107 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 RNU6-1316P-201ENST00000384242 108 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms