Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AC007954.1-201ENST00000554198 494 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 Z99129.2-201ENST00000619967 314 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 RNU6-989P-201ENST00000362756 107 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 RPL31P54-201ENST00000429803 370 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AC241584.1-201ENST00000438469 1241 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AC104073.1-201ENST00000451988 151 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AC103975.1-201ENST00000482506 483 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AC104629.1-201ENST00000494226 508 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AC079089.3-201ENST00000603094 673 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AC092574.1-201ENST00000609771 420 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 VN1R74P-201ENST00000613259 503 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 MIR6817-201ENST00000615588 66 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AC140725.3-201ENST00000616193 880 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AL355493.4-201ENST00000618530 292 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AC073968.1-201ENST00000618594 637 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AC073348.1-201ENST00000623002 331 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 AC130650.2-201ENST00000618736 2403 ntBASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HOXC10Q9NYD6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 TAB3P1-202ENST00000452645 1634 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 RNU6-839P-201ENST00000363347 108 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 U3.12-201ENST00000364498 214 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 MIR217-201ENST00000384817 110 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 RNU6-712P-201ENST00000410558 100 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AC244505.4-201ENST00000434905 287 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AL645638.1-201ENST00000440519 361 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 SSXP5-201ENST00000443473 287 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 RPL7P36-201ENST00000444633 681 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 KLRA1P-201ENST00000503499 986 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AC011352.3-201ENST00000505162 593 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AC087894.1-201ENST00000538359 518 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AP002770.2-201ENST00000543613 532 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 OR7K1P-201ENST00000546439 926 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AC126365.2-201ENST00000580630 379 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AP002371.2-201ENST00000624450 503 ntBASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXC10Q9NYD6 AP000526.1-201ENST00000603308 1388 ntBASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 VTRNA1-1-201ENST00000363120 99 ntBASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 CYCSP45-201ENST00000402289 315 ntBASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 AL133384.1-201ENST00000412744 351 ntBASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 FCF1P2-201ENST00000415284 583 ntBASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 RPL21P41-201ENST00000459863 264 ntBASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 AC245166.1-201ENST00000521012 253 ntBASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 AC023825.1-201ENST00000566704 1030 ntBASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 AC090666.1-201ENST00000578241 445 ntBASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 AC008507.2-201ENST00000588402 1176 ntBASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 AC106900.2-201ENST00000604994 317 ntBASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 AL512506.2-201ENST00000624472 458 ntBASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 AP000720.1-201ENST00000625091 483 ntBASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXC10Q9NYD6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms