Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.46□□□□□ -1.7
DDX56Q9NY93 AC079448.1-201ENST00000449377 373 ntBASIC4.46□□□□□ -1.7
DDX56Q9NY93 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.46□□□□□ -1.7
DDX56Q9NY93 C1DP4-201ENST00000455429 424 ntBASIC4.46□□□□□ -1.7
DDX56Q9NY93 RN7SL585P-201ENST00000470538 280 ntBASIC4.46□□□□□ -1.7
DDX56Q9NY93 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
DDX56Q9NY93 AC107401.1-201ENST00000503426 685 ntBASIC4.46□□□□□ -1.7
DDX56Q9NY93 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.46□□□□□ -1.7
DDX56Q9NY93 RNU6-927P-201ENST00000516199 100 ntBASIC4.46□□□□□ -1.7
DDX56Q9NY93 RNU6-352P-201ENST00000516908 107 ntBASIC4.46□□□□□ -1.7
DDX56Q9NY93 OR5G4P-201ENST00000525251 760 ntBASIC4.46□□□□□ -1.7
DDX56Q9NY93 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.46□□□□□ -1.7
DDX56Q9NY93 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
DDX56Q9NY93 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.46□□□□□ -1.7
DDX56Q9NY93 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.46□□□□□ -1.7
DDX56Q9NY93 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.46□□□□□ -1.7
DDX56Q9NY93 AL354984.3-201ENST00000604803 325 ntBASIC4.46□□□□□ -1.7
DDX56Q9NY93 AC090132.2-201ENST00000615881 347 ntBASIC4.46□□□□□ -1.7
DDX56Q9NY93 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
DDX56Q9NY93 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.46□□□□□ -1.7
DDX56Q9NY93 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.46□□□□□ -1.7
DDX56Q9NY93 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
DDX56Q9NY93 AC118273.1-201ENST00000525324 3006 ntBASIC4.46□□□□□ -1.7
DDX56Q9NY93 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
DDX56Q9NY93 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
DDX56Q9NY93 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
DDX56Q9NY93 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
DDX56Q9NY93 AP001148.1-201ENST00000624124 2359 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
DDX56Q9NY93 MIR448-201ENST00000362131 111 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 RNU6-108P-201ENST00000365558 107 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
DDX56Q9NY93 Y_RNA.505-201ENST00000384489 102 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX56Q9NY93 AL031779.1-201ENST00000415663 330 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 AL590139.1-201ENST00000416267 400 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 UBE2D3P2-201ENST00000424409 445 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.45□□□□□ -1.7
DDX56Q9NY93 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX56Q9NY93 RPL23AP89-201ENST00000439324 255 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 PHBP16-201ENST00000446318 950 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 MTCYBP1-201ENST00000454315 1119 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 AC013267.1-201ENST00000458227 267 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 AC084357.1-201ENST00000473404 255 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 AC025445.1-201ENST00000502728 300 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX56Q9NY93 RN7SKP92-201ENST00000517266 244 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 MTCYBP20-201ENST00000524239 1129 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX56Q9NY93 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.45□□□□□ -1.7
DDX56Q9NY93 NCAPGP2-201ENST00000557911 754 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 AC006960.3-201ENST00000561845 705 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX56Q9NY93 RPL12P25-202ENST00000598100 674 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX56Q9NY93 AC100827.5-201ENST00000615883 426 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 AC002076.2-201ENST00000617362 122 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 AC007998.5-201ENST00000622938 237 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 AC008785.1-201ENST00000624475 456 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 LRRC77P-213ENST00000637727 880 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 TPTE2P4-201ENST00000258589 1605 ntBASIC4.45□□□□□ -1.7
DDX56Q9NY93 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.45□□□□□ -1.7
DDX56Q9NY93 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
DDX56Q9NY93 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 MTND4P5-201ENST00000435821 1374 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX56Q9NY93 RNU6-181P-201ENST00000363225 107 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 RHOT1P2-201ENST00000366423 333 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 RNU6-701P-201ENST00000384059 107 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 SNORA1.3-201ENST00000384676 136 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 RNU6-192P-201ENST00000391253 100 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 RNU2-39P-201ENST00000410604 198 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 RNU6-953P-201ENST00000459154 107 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 RN7SL98P-201ENST00000462271 300 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 AC007182.2-201ENST00000489251 402 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 RN7SL810P-201ENST00000493031 276 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 AC117522.1-201ENST00000509821 380 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 AC091133.4-201ENST00000511142 308 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 RNU6-445P-201ENST00000516949 107 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 IGLVIV-65-201ENST00000517313 360 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 AC004024.1-201ENST00000549244 247 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX56Q9NY93 AC053481.4-201ENST00000583164 216 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 AC098848.2-201ENST00000588023 330 ntBASIC4.44□□□□□ -1.7
DDX56Q9NY93 AL022154.1-201ENST00000604698 785 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms