Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 RNU1-19P-201ENST00000363306 165 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 MIR628-201ENST00000385229 95 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 RNA5SP56-201ENST00000410277 118 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 RNU4-34P-201ENST00000410431 124 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 AL354868.1-201ENST00000417077 482 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 AL391219.1-201ENST00000422570 483 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 RNU7-169P-201ENST00000459456 61 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 RNU7-138P-201ENST00000459479 64 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 AC090602.1-201ENST00000469695 252 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 AP000926.1-201ENST00000479573 241 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 RNA5SP362-201ENST00000516048 118 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 RNA5SP34-201ENST00000516887 130 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 MRPS36P4-201ENST00000534436 298 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 AC009852.2-201ENST00000567898 485 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 AC093799.2-201ENST00000610062 578 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 AC000095.2-202ENST00000637415 154 ntBASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 AL591135.1-201ENST00000401578 5914 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 RNU6-1329P-201ENST00000365664 107 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 RNU6-946P-201ENST00000383878 107 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 RNU6-130P-201ENST00000411112 103 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 H2AFZP5-201ENST00000446960 382 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 AP000942.1-201ENST00000463969 747 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 RPL31P60-201ENST00000478450 367 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 RNU7-200P-201ENST00000516105 62 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 Y_RNA.687-201ENST00000516558 91 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 RPL23AP84-201ENST00000571193 464 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 Z83818.1-201ENST00000603584 150 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 AL591516.1-201ENST00000611326 274 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 AP005431.1-201ENST00000618479 319 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 AC118658.2-201ENST00000618697 459 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 AC018445.2-201ENST00000622987 260 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 AP001784.1-201ENST00000624107 428 ntBASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CUEDC1Q9NWM3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 RNU6-989P-201ENST00000362756 107 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 RNU6-1290P-201ENST00000362957 109 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 RNA5SP132-201ENST00000364725 118 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 U3.15-201ENST00000365398 212 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 SNORD51-201ENST00000384320 80 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 RNU6-837P-201ENST00000391056 108 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 COX6CP10-201ENST00000416832 224 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 AC093106.2-201ENST00000428212 385 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 AC091286.1-201ENST00000431233 461 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 GAPDHP58-201ENST00000438477 1006 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 AL353691.1-201ENST00000451332 387 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 RN7SL189P-201ENST00000468631 289 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 RN7SL799P-201ENST00000475891 298 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 AL049830.2-201ENST00000480072 201 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 AC110792.1-201ENST00000491826 472 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 NDUFB4P9-201ENST00000511646 388 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 RNU6-1338P-201ENST00000516328 91 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 HMGN2P36-201ENST00000529541 409 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 HIGD1AP5-201ENST00000529959 259 ntBASIC5.59□□□□□ -1.51
CUEDC1Q9NWM3 CBX3P8-201ENST00000532412 525 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms