Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCM2LQ9NUG4 BDP1P-201ENST00000582658 1990 ntBASIC4.36□□□□□ -1.71
CCM2LQ9NUG4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC068254.2-201ENST00000623938 3577 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC067945.1-201ENST00000342609 618 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 SNORA72.1-201ENST00000363485 129 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 SNORA62.1-201ENST00000364287 154 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 MIR298-201ENST00000401212 88 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 MIR1193-201ENST00000408109 78 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 RNA5SP113-201ENST00000410486 84 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC138393.2-201ENST00000414742 246 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 MTATP6P4-201ENST00000427725 675 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC069285.2-201ENST00000440210 275 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 HMGN2P21-201ENST00000447764 270 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 CACYBPP2-201ENST00000453625 678 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AL163973.1-201ENST00000484753 577 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC025445.1-201ENST00000502728 300 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 MRPS33P2-201ENST00000507850 322 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 KLHL2P1-201ENST00000508691 521 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC025465.4-201ENST00000513422 638 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 RNU6-390P-201ENST00000516259 103 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 SNORA20.3-201ENST00000516880 132 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 SNORD60.2-201ENST00000516883 86 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 OR4H12P-201ENST00000556269 907 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 MIR4277-201ENST00000578298 84 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC025253.1-201ENST00000613623 543 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC092794.2-201ENST00000620933 563 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC091905.2-201ENST00000623143 306 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AC092326.2-201ENST00000624772 1561 ntBASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCM2LQ9NUG4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 RHOT1P2-201ENST00000366423 333 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 RNU1-44P-201ENST00000384453 163 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 MT-TL1-201ENST00000386347 75 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 AL354719.1-201ENST00000406535 843 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 OR9R1P-201ENST00000412200 877 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 AC024082.2-201ENST00000434771 238 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 MTND5P20-201ENST00000448677 143 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 OR1H1P-201ENST00000448731 937 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 HMGB3P30-201ENST00000457863 606 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 RPS29P15-201ENST00000458329 171 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 RN7SKP276-201ENST00000516242 268 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 Y_RNA.702-201ENST00000516843 96 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 RNA5SP503-201ENST00000517047 117 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 AF235103.2-201ENST00000525753 346 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 HIF1AP1-201ENST00000553642 175 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 AC022726.1-201ENST00000587475 207 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 SDR42E1P2-201ENST00000614861 481 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 AL138721.1-201ENST00000616756 179 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 uc_338.11-201ENST00000619132 160 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 AL360181.4-201ENST00000621752 134 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 MIR6830-201ENST00000636015 70 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 U6.114-201ENST00000636407 96 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 A2MP1-204ENST00000566278 4130 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms