Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AC092447.10-201ENST00000620607 1652 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AC087359.1-201ENST00000508335 1740 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 SNORD56.3-201ENST00000363507 71 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 RNU6-173P-201ENST00000364215 104 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 RNU6-882P-201ENST00000391025 103 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 RPS15AP38-201ENST00000413110 372 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AL158156.1-201ENST00000422509 473 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 YWHAZP7-201ENST00000436906 631 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AC091862.1-201ENST00000438016 1100 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AL591503.2-201ENST00000442314 1005 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 RN7SL601P-201ENST00000471221 293 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 RPL7P23-201ENST00000493874 747 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AL358832.1-201ENST00000497800 389 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 HSPE1P23-201ENST00000509838 286 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 SNORA64.4-201ENST00000516632 81 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 MTND3P12-201ENST00000559068 328 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AP001029.3-201ENST00000588063 596 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AL606834.2-201ENST00000602954 668 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AL353778.1-201ENST00000603149 408 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AL139344.1-201ENST00000605228 195 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 MIR7112-201ENST00000616126 65 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AC002550.2-201ENST00000621246 394 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 AC017037.3-201ENST00000625016 472 ntBASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.1□□□□□ -1.75
SMC4Q9NTJ3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 SRP72P2-201ENST00000344851 1979 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 Y_RNA.333-201ENST00000365274 102 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 MIR135A2-201ENST00000384854 100 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 VPS26BP1-201ENST00000417155 755 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 RPL21P32-201ENST00000419877 477 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AL035407.1-201ENST00000429211 571 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 SETP5-201ENST00000437270 562 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 MTND1P26-201ENST00000440488 538 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 OR6K5P-201ENST00000447050 945 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 MTND1P31-201ENST00000449206 961 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 SNORD121B-201ENST00000458838 81 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AC147055.4-201ENST00000504399 745 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AC098862.1-201ENST00000504991 413 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AC010265.1-201ENST00000513509 211 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AC017037.2-201ENST00000513850 890 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 RNU1-61P-201ENST00000516107 151 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 RNU6-714P-201ENST00000516963 103 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AC103783.1-201ENST00000520506 373 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 UBTFL10-201ENST00000528532 562 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AC012443.1-201ENST00000605605 231 ntBASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.09□□□□□ -1.75
SMC4Q9NTJ3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SMC4Q9NTJ3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
SMC4Q9NTJ3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.09□□□□□ -1.76
SMC4Q9NTJ3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SMC4Q9NTJ3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SMC4Q9NTJ3 RPL17P50-201ENST00000396131 546 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 RN7SKP266-201ENST00000410232 287 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 RNA5SP120-201ENST00000410900 112 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 CCDC58P2-201ENST00000417131 366 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 BX890604.2-201ENST00000427883 474 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 RN7SL807P-201ENST00000470923 297 ntBASIC4.08□□□□□ -1.76
SMC4Q9NTJ3 AC068587.2-201ENST00000478386 781 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms