Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.57□□□□□ -2
TREX1Q9NSU2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.57□□□□□ -2
TREX1Q9NSU2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.57□□□□□ -2
TREX1Q9NSU2 SEPT14P24-201ENST00000447236 180 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 MTCO1P48-201ENST00000448024 1096 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 AL589880.1-201ENST00000448271 287 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 SNORD109B-201ENST00000458961 67 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 SNORD109A-201ENST00000459128 67 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 AC013828.1-201ENST00000481845 158 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 SRIP1-201ENST00000489235 288 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.57□□□□□ -2
TREX1Q9NSU2 RN7SKP40-201ENST00000517211 242 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.57□□□□□ -2
TREX1Q9NSU2 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.57□□□□□ -2
TREX1Q9NSU2 COX6CP8-201ENST00000522620 226 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.57□□□□□ -2
TREX1Q9NSU2 CYB5AP5-201ENST00000549779 389 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 GTF3AP2-201ENST00000557014 266 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 AC090330.1-201ENST00000588646 764 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 AC007619.2-201ENST00000605743 379 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 AP000238.1-201ENST00000608759 426 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TREX1Q9NSU2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.56□□□□□ -2
TREX1Q9NSU2 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
TREX1Q9NSU2 AL035405.1-201ENST00000400795 710 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 RNU2-28P-201ENST00000410457 189 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 AC092638.1-201ENST00000411966 1275 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 AC080125.1-201ENST00000414888 684 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.56□□□□□ -2
TREX1Q9NSU2 MTCYBP32-201ENST00000427945 1084 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.56□□□□□ -2
TREX1Q9NSU2 MTCYBP15-201ENST00000433123 1127 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.56□□□□□ -2
TREX1Q9NSU2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.56□□□□□ -2
TREX1Q9NSU2 AP000936.2-201ENST00000447151 681 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 SNRPGP6-201ENST00000451124 220 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 snoU109.4-201ENST00000458953 143 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.56□□□□□ -2
TREX1Q9NSU2 AC006445.2-201ENST00000510061 472 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 AC096725.1-201ENST00000514266 313 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.56□□□□□ -2
TREX1Q9NSU2 HMGB1P41-201ENST00000520234 440 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 CKS1BP7-201ENST00000522230 235 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 MTCO1P47-201ENST00000523889 1271 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 AP000867.2-201ENST00000532468 320 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 AC068339.2-201ENST00000534395 618 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.56□□□□□ -2
TREX1Q9NSU2 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.56□□□□□ -2
TREX1Q9NSU2 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.56□□□□□ -2
TREX1Q9NSU2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
TREX1Q9NSU2 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.56□□□□□ -2
TREX1Q9NSU2 VN1R90P-201ENST00000595717 726 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 AL160237.3-201ENST00000604114 1013 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 AC010738.1-201ENST00000604970 987 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
TREX1Q9NSU2 CYP3A51P-201ENST00000633513 256 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 AC110079.1-202ENST00000635213 138 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.56□□□□□ -2
TREX1Q9NSU2 DBF4P1-201ENST00000412976 1892 ntBASIC2.56□□□□□ -2
TREX1Q9NSU2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
TREX1Q9NSU2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
TREX1Q9NSU2 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.55□□□□□ -2
TREX1Q9NSU2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.55□□□□□ -2
TREX1Q9NSU2 SNORD62.1-201ENST00000362541 86 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 RNU6-492P-201ENST00000363035 104 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.55□□□□□ -2
TREX1Q9NSU2 RNU6-657P-201ENST00000383904 107 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
TREX1Q9NSU2 RPL22P22-201ENST00000395439 379 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TREX1Q9NSU2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 AL139095.1-201ENST00000404326 391 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 NDUFB4P4-201ENST00000404822 243 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 RNU2-52P-201ENST00000410680 190 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 AC096664.2-201ENST00000411843 406 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.55□□□□□ -2
TREX1Q9NSU2 AC092634.6-201ENST00000418558 192 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 MTCO1P39-201ENST00000426148 480 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 AL096829.2-201ENST00000446582 742 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.55□□□□□ -2
TREX1Q9NSU2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.55□□□□□ -2
TREX1Q9NSU2 RNU6-1095P-201ENST00000516148 108 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 SNORA48.10-201ENST00000516965 160 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 AC090136.1-201ENST00000520009 240 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.55□□□□□ -2
TREX1Q9NSU2 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.55□□□□□ -2
TREX1Q9NSU2 EIF4BP1-201ENST00000554881 351 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 AC044913.1-201ENST00000557200 430 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.55□□□□□ -2
TREX1Q9NSU2 RPL12P50-201ENST00000603116 116 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 HSPE1P7-201ENST00000604681 321 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 AL136363.1-201ENST00000605349 337 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 AC107308.1-201ENST00000615897 301 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 AC068880.5-201ENST00000624331 290 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 AL356094.1-201ENST00000624663 1212 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 CRYM-AS1-204ENST00000637983 556 ntBASIC2.55□□□□□ -2
TREX1Q9NSU2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
TREX1Q9NSU2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TREX1Q9NSU2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms