Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 NDUFS5P1-201ENST00000405668 289 ntBASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 RNU4-26P-201ENST00000410270 107 ntBASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 AC114491.1-201ENST00000416095 246 ntBASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 RPL35AP12-201ENST00000425362 338 ntBASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 MTND3P16-201ENST00000452205 344 ntBASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 VN1R105P-201ENST00000486595 910 ntBASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 RPL36AP41-201ENST00000493820 306 ntBASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 ERHP1-201ENST00000523006 310 ntBASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 RAB11AP2-201ENST00000545905 639 ntBASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 AC105129.1-201ENST00000560250 297 ntBASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 U3.53-201ENST00000628922 216 ntBASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM39Q9HCM9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RN7SKP115-201ENST00000363177 317 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 SNORD113.2-201ENST00000364166 89 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RNU4-66P-201ENST00000365199 138 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 SNORD115-7-201ENST00000365306 82 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RNU6-61P-201ENST00000365528 109 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RNU6-946P-201ENST00000383878 107 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RNU6-701P-201ENST00000384059 107 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RNU6-398P-201ENST00000384143 109 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RNU6-1181P-201ENST00000384191 106 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AC097374.1-203ENST00000400783 485 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 HSPD1P16-201ENST00000402302 394 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RPS4XP9-201ENST00000405151 780 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RNU4-46P-201ENST00000410818 138 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RPS23P10-201ENST00000416185 486 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 DUTP6-201ENST00000425573 462 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AL365400.1-201ENST00000431854 640 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AC011753.3-201ENST00000443436 406 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AL162395.1-201ENST00000457882 422 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 CYCSP34-201ENST00000458172 304 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RPL7AP28-201ENST00000464513 571 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RPL21P99-201ENST00000480369 423 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AC012158.1-204ENST00000483430 465 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AC008897.1-201ENST00000494006 347 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AC092436.1-201ENST00000506450 503 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 KLHL2P1-201ENST00000508691 521 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AC104806.1-201ENST00000508720 308 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AF186190.1-201ENST00000517470 480 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 SUMO2P20-201ENST00000520803 283 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AP005435.4-201ENST00000529514 284 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 DYNLL1P4-201ENST00000549314 266 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RPL23AP84-201ENST00000571193 464 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AC024619.4-201ENST00000580924 316 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AL117336.2-201ENST00000602435 335 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AC174048.1-201ENST00000603389 144 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 C8orf59P2-201ENST00000603441 271 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 MIR6820-201ENST00000611508 62 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 MIR8069-1-201ENST00000616627 86 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RN7SL722P-201ENST00000617780 284 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 RN7SL565P-201ENST00000618246 284 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AC068831.8-201ENST00000620171 435 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 MIR8069-2-201ENST00000621412 86 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AL136221.1-201ENST00000621449 509 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AL353748.2-201ENST00000622148 471 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AC011155.2-201ENST00000623202 216 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 AC092435.4-201ENST00000623012 4159 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 MFSD8-216ENST00000641147 4009 ntBASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM39Q9HCM9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM39Q9HCM9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TRIM39Q9HCM9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM39Q9HCM9 Y_RNA.100-201ENST00000363141 102 ntBASIC4.59□□□□□ -1.67
TRIM39Q9HCM9 Y_RNA.166-201ENST00000363730 102 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms