Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC008568.2-201ENST00000623862 2313 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
BRF2Q9HAW0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.65□□□□□ -1.82
BRF2Q9HAW0 AL390237.1-201ENST00000404226 1415 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 RPL32P3-201ENST00000359025 275 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 RNU6-213P-201ENST00000384051 104 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 Y_RNA.553-201ENST00000384670 102 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 MIR19A-201ENST00000384878 82 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 HSPE1P8-201ENST00000406997 288 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AL591034.1-201ENST00000407447 340 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 RN7SKP53-201ENST00000411337 315 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AC016907.1-201ENST00000419483 435 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 YPEL5P1-201ENST00000419731 367 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 RPL21P109-201ENST00000422213 475 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AC092641.1-201ENST00000440229 772 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AL049734.2-201ENST00000441066 616 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 HSFY6P-201ENST00000445573 403 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 SSXP1-201ENST00000453640 473 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AL033528.1-201ENST00000453780 140 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AC135721.1-201ENST00000497954 479 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AC109464.2-201ENST00000510242 943 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 GMPSP1-201ENST00000514075 579 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 SNORA70.16-201ENST00000516390 95 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 SNORA31.22-201ENST00000517204 135 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AC123904.2-201ENST00000548059 300 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 HSPE1P5-201ENST00000561489 272 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AC137800.2-201ENST00000574375 120 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 MTCYBP33-201ENST00000575007 1130 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 RSL24D1P11-201ENST00000591045 491 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AC106900.2-201ENST00000604994 317 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AL355472.4-201ENST00000610233 626 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 TUG1_2.1-201ENST00000614234 87 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AC013476.2-201ENST00000614456 459 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AC008121.2-201ENST00000614647 523 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 MIR6758-201ENST00000620653 63 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AC012150.2-201ENST00000621300 544 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 FAM35DP-201ENST00000323387 2712 ntBASIC3.65□□□□□ -1.83
BRF2Q9HAW0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
BRF2Q9HAW0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 Y_RNA.201-201ENST00000364052 96 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 U1.1-201ENST00000384101 164 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 MIR141-201ENST00000384975 95 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 UBE2FP1-201ENST00000416536 447 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 MTCO2P34-201ENST00000421994 607 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 AC006366.1-201ENST00000422002 759 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 TXNP1-201ENST00000441872 371 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 RPL17P49-201ENST00000443728 411 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 H2AFZP6-201ENST00000444403 394 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 AC009220.1-201ENST00000451614 275 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 CFTRP1-201ENST00000456646 183 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 AL049714.1-201ENST00000466686 347 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 ACTR3P3-201ENST00000480448 893 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 CEACAMP10-202ENST00000495431 496 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 RAC1P2-201ENST00000511164 579 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.64□□□□□ -1.83
BRF2Q9HAW0 AL133153.1-201ENST00000557756 303 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 AC005771.1-201ENST00000585581 349 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 AC087752.4-201ENST00000605911 462 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 RNU6-87P-201ENST00000607561 108 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 AP000254.1-201ENST00000609934 520 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 AC138749.5-201ENST00000611461 208 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.64□□□□□ -1.83
BRF2Q9HAW0 AC116165.2-201ENST00000616705 206 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms