Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDT1Q9H211 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.88□□□□□ -1.79
CDT1Q9H211 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.88□□□□□ -1.79
CDT1Q9H211 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.88□□□□□ -1.79
CDT1Q9H211 AL139415.2-201ENST00000431968 163 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.88□□□□□ -1.79
CDT1Q9H211 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.88□□□□□ -1.79
CDT1Q9H211 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.88□□□□□ -1.79
CDT1Q9H211 AL353572.1-201ENST00000442490 417 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.88□□□□□ -1.79
CDT1Q9H211 RBMY2UP-201ENST00000453474 324 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 HMGB1P15-201ENST00000453854 435 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.88□□□□□ -1.79
CDT1Q9H211 snoU13.24-201ENST00000458998 104 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 AP000873.1-201ENST00000463987 400 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 AC104563.1-201ENST00000476147 376 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.88□□□□□ -1.79
CDT1Q9H211 AC023424.2-201ENST00000493479 777 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.88□□□□□ -1.79
CDT1Q9H211 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.88□□□□□ -1.79
CDT1Q9H211 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.88□□□□□ -1.79
CDT1Q9H211 AC093677.1-201ENST00000514414 678 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 RNU6-579P-201ENST00000516879 102 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 MTND4LP18-201ENST00000526864 291 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.88□□□□□ -1.79
CDT1Q9H211 AP000889.1-201ENST00000530968 660 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.88□□□□□ -1.79
CDT1Q9H211 AL360157.1-201ENST00000565962 87 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDT1Q9H211 uc_338.32-201ENST00000615087 172 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 U4.6-201ENST00000621618 127 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 AL603839.4-201ENST00000624658 1005 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 SEPT14P19-203ENST00000633205 211 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 AC244258.1-201ENST00000637553 1071 ntBASIC3.88□□□□□ -1.79
CDT1Q9H211 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDT1Q9H211 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDT1Q9H211 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDT1Q9H211 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDT1Q9H211 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.87□□□□□ -1.79
CDT1Q9H211 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.87□□□□□ -1.79
CDT1Q9H211 AC095050.2-201ENST00000510748 1458 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDT1Q9H211 RNU1-18P-201ENST00000363062 164 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 RNA5SP42-201ENST00000364278 115 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CDT1Q9H211 RNY3P14-201ENST00000384309 102 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 RNU6-809P-201ENST00000384461 107 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 MIR183-201ENST00000384958 110 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CDT1Q9H211 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 AC017079.2-201ENST00000416102 485 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.87□□□□□ -1.79
CDT1Q9H211 AL596276.1-201ENST00000434465 418 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 RPL23AP83-201ENST00000434984 473 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 DNAJC19P4-201ENST00000440115 345 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 SDCBPP1-201ENST00000440192 890 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.87□□□□□ -1.79
CDT1Q9H211 RPL7P36-201ENST00000444633 681 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 RPL29P29-201ENST00000448725 423 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.87□□□□□ -1.79
CDT1Q9H211 RPS20P24-201ENST00000457473 361 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 RN7SL93P-201ENST00000463035 293 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.87□□□□□ -1.79
CDT1Q9H211 RN7SL293P-201ENST00000481765 281 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 AC138853.1-201ENST00000503549 823 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.87□□□□□ -1.79
CDT1Q9H211 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CDT1Q9H211 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CDT1Q9H211 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.87□□□□□ -1.79
CDT1Q9H211 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.87□□□□□ -1.79
CDT1Q9H211 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.87□□□□□ -1.79
CDT1Q9H211 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.87□□□□□ -1.79
CDT1Q9H211 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.87□□□□□ -1.79
CDT1Q9H211 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.87□□□□□ -1.79
CDT1Q9H211 AC007458.1-201ENST00000542812 373 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 OR6C73P-201ENST00000546432 358 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 CBX3P5-201ENST00000552017 521 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 AC087481.2-201ENST00000565492 330 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 TPRKBP2-201ENST00000565969 475 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 MIR5697-201ENST00000578045 78 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 AC005771.1-201ENST00000585581 349 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 SEPT7P9-203ENST00000604116 343 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 AC109347.2-201ENST00000610220 349 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 U6atac.1-201ENST00000616025 117 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 AC015967.1-201ENST00000619893 476 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 AC073534.2-201ENST00000620377 381 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 AC040168.1-201ENST00000623594 991 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.87□□□□□ -1.79
CDT1Q9H211 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDT1Q9H211 AC006504.1-201ENST00000562493 3666 ntBASIC3.87□□□□□ -1.79
CDT1Q9H211 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
CDT1Q9H211 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDT1Q9H211 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.87□□□□□ -1.79
CDT1Q9H211 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.86□□□□□ -1.79
CDT1Q9H211 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.86□□□□□ -1.79
CDT1Q9H211 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDT1Q9H211 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDT1Q9H211 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDT1Q9H211 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms