Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 MAPK10-349ENST00000641767 3661 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC008669.1-201ENST00000565823 2178 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 Y_RNA.274-201ENST00000364714 101 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-190P-201ENST00000384154 102 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 Y_RNA.539-201ENST00000384635 107 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 PCNPP3-201ENST00000393579 471 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 RNU2-71P-201ENST00000411395 189 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC007738.1-201ENST00000413892 348 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 SRSF1P1-201ENST00000424058 520 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 RPL12P34-201ENST00000424532 479 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 FAR2P4-202ENST00000425399 584 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 GSTM5P1-201ENST00000434751 660 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 RPS3AP12-201ENST00000443616 753 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC104073.1-201ENST00000451988 151 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 MTCO3P8-201ENST00000453691 755 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 RNU7-167P-201ENST00000459160 62 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC005726.1-201ENST00000494679 427 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC096745.1-201ENST00000509945 370 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 ATP5LP3-201ENST00000514223 304 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 SNORA40.15-201ENST00000516884 107 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-798P-201ENST00000516912 103 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-255P-201ENST00000516957 105 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC026371.1-201ENST00000551867 419 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC015720.2-201ENST00000567709 334 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AL162431.4-201ENST00000604674 411 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 HMGN2P28-201ENST00000606102 262 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC009570.1-201ENST00000609599 745 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC109309.2-201ENST00000612597 332 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC022467.1-201ENST00000614738 749 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC132068.1-201ENST00000623805 459 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC127459.3-201ENST00000624328 466 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 AL592148.3-201ENST00000608771 2646 ntBASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.75□□□□□ -1.49
NUCKS1Q9H1E3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 AL049555.1-201ENST00000562834 1933 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-212P-201ENST00000362642 104 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 RN7SKP160-201ENST00000363804 340 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-960P-201ENST00000364056 120 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 SNORA23-201ENST00000365128 182 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 RNA5SP240-201ENST00000365355 128 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 Y_RNA.464-201ENST00000384282 110 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 AC108032.1-201ENST00000416706 207 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 AC093106.2-201ENST00000428212 385 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 AC097713.2-201ENST00000430199 356 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 RPS26P56-201ENST00000444468 240 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 CYCSP34-201ENST00000458172 304 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 AC100832.1-201ENST00000471945 383 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 TRBVB-201ENST00000477100 408 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 RN7SL547P-201ENST00000490793 290 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-1092P-201ENST00000516955 87 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-685P-201ENST00000517088 95 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 RNU6-64P-201ENST00000517119 105 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 RANP3-201ENST00000530970 276 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 AP004607.2-201ENST00000533949 322 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 AC090517.1-201ENST00000569307 266 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 MIR548AI-201ENST00000579940 88 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 AC008521.1-201ENST00000587471 187 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 AL359854.1-201ENST00000614203 1594 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 AL606537.1-201ENST00000607258 2011 ntBASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
NUCKS1Q9H1E3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 NEAT1-202ENST00000501122 22743 ntBASIC5.73□□□□□ -1.49
NUCKS1Q9H1E3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms