Protein–RNA interactions for Protein: Q9GZZ0

HOXD1, Homeobox protein Hox-D1, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1Q9GZZ0 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 U73023.1-201ENST00000603134 700 ntBASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 AL022161.1-201ENST00000604390 213 ntBASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 IGHV3-29-201ENST00000604817 344 ntBASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 AC092354.1-201ENST00000606057 376 ntBASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 AC090425.2-201ENST00000608818 501 ntBASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 U4.6-201ENST00000621618 127 ntBASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 Z69908.1-201ENST00000622603 247 ntBASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 CR381572.1-201ENST00000625098 102 ntBASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 AL034408.1-202ENST00000636088 415 ntBASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 AC017071.1-201ENST00000564407 2204 ntBASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXD1Q9GZZ0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 SNORA31-201ENST00000362607 130 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 RNU6-1249P-201ENST00000363237 111 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 RNU5F-7P-201ENST00000363696 115 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 RNU6-501P-201ENST00000364072 100 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 Y_RNA.234-201ENST00000364409 97 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 SNORD116-9-201ENST00000384000 95 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 SNORD116-3-201ENST00000384287 95 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 SNORD51-201ENST00000384320 80 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 SNORD116-7-201ENST00000384404 95 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 SNORD116-5-201ENST00000384462 95 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 MIR218-2-201ENST00000385006 110 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 RNU2-47P-201ENST00000410649 186 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 SYF2P2-201ENST00000417620 583 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AL513174.1-201ENST00000423182 629 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 BX119904.4-201ENST00000424402 301 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AL512649.1-201ENST00000428997 581 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC129850.1-201ENST00000436203 508 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 HSPD1P21-201ENST00000436541 245 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 RSU1P2-202ENST00000437884 485 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 TRIM60P18-201ENST00000441518 828 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 RPL21P133-201ENST00000443666 476 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AL353691.1-201ENST00000451332 387 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC007967.1-201ENST00000455422 1159 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 OR6K1P-201ENST00000456766 971 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 HMGN1P18-201ENST00000457642 277 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC021205.2-201ENST00000480069 347 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC068724.1-201ENST00000487100 792 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC006483.1-201ENST00000487308 313 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC106872.3-201ENST00000495104 446 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 SNORA70.18-201ENST00000516696 98 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 MIR2276-201ENST00000516886 89 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 PCMTD1P2-201ENST00000565017 355 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 ACTR3BP3-201ENST00000565577 979 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 MIR4506-201ENST00000584693 77 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC004853.1-201ENST00000604902 698 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 BCRP9-201ENST00000605312 388 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC245008.1-201ENST00000608123 476 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AL596245.1-201ENST00000618994 362 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC244258.1-201ENST00000637553 1071 ntBASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXD1Q9GZZ0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
HOXD1Q9GZZ0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HOXD1Q9GZZ0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXD1Q9GZZ0 AL161781.1-201ENST00000354277 403 ntBASIC3.18□□□□□ -1.9
HOXD1Q9GZZ0 RNU4-21P-201ENST00000362802 126 ntBASIC3.18□□□□□ -1.9
HOXD1Q9GZZ0 RNU5F-6P-201ENST00000362979 116 ntBASIC3.18□□□□□ -1.9
HOXD1Q9GZZ0 Y_RNA.97-201ENST00000363094 102 ntBASIC3.18□□□□□ -1.9
HOXD1Q9GZZ0 RNA5SP189-201ENST00000364920 115 ntBASIC3.18□□□□□ -1.9
HOXD1Q9GZZ0 MIR200C-201ENST00000384980 68 ntBASIC3.18□□□□□ -1.9
HOXD1Q9GZZ0 U8.14-201ENST00000390843 143 ntBASIC3.18□□□□□ -1.9
HOXD1Q9GZZ0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms