Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 ZNF271P-202ENST00000465539 1970 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 AC097714.1-201ENST00000511272 1647 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 RNA5SP139-201ENST00000364340 117 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 OR5H15-201ENST00000383696 930 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 MIR764-201ENST00000390811 85 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 RNU6-821P-201ENST00000390995 107 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 FAM103A2P-201ENST00000444122 354 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 HMGN3P1-201ENST00000453847 193 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 AC073901.1-201ENST00000462471 408 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 RN7SKP31-201ENST00000516354 278 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 RNA5SP402-201ENST00000517148 110 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 OR8K4P-201ENST00000534608 872 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 NOP56P3-201ENST00000549457 385 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 DUXAP3-201ENST00000603616 594 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 AC103810.6-201ENST00000606708 136 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 AC104237.2-201ENST00000612456 443 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 AL353997.5-201ENST00000618886 171 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 PISRT1-201ENST00000626175 531 ntBASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
UPF3BQ9BZI7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 OR4G2P-202ENST00000641004 1759 ntBASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 AL512283.1-201ENST00000606756 1384 ntBASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 RNA5SP393-201ENST00000363423 117 ntBASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 SNORA27.3-201ENST00000364937 134 ntBASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 MIR1289-2-201ENST00000408360 111 ntBASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 LSM1P1-201ENST00000438629 273 ntBASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 AL109741.2-201ENST00000455561 343 ntBASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 RNA5SP310-201ENST00000459084 116 ntBASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 MTCO1P31-201ENST00000506355 492 ntBASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 OR4R2P-201ENST00000530815 597 ntBASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 OR11H5P-201ENST00000554039 926 ntBASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 GLUD1P4-201ENST00000590914 418 ntBASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 RPL23AP78-201ENST00000599928 470 ntBASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 SEC63P2-201ENST00000503863 1939 ntBASIC2.79□□□□□ -1.96
UPF3BQ9BZI7 ENSAP3-201ENST00000312710 333 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 RPS4XP3-201ENST00000398541 413 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 RNU2-25P-201ENST00000411041 191 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 UBE2V1P9-201ENST00000414760 368 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 NANOGP5-201ENST00000424456 877 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 RPS15AP28-201ENST00000435088 386 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 MTND2P21-201ENST00000436242 1042 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 CR769767.1-201ENST00000436337 346 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 RPL30P14-201ENST00000482744 348 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 AC234781.5-201ENST00000508429 271 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 AC109329.2-201ENST00000519658 482 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 AC021269.2-201ENST00000532318 330 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 NUTF2P8-201ENST00000604593 363 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 AL133507.1-201ENST00000605269 557 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 MTND2P41-201ENST00000637599 773 ntBASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
UPF3BQ9BZI7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 RNU6-989P-201ENST00000362756 107 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 RNU6-1339P-201ENST00000363574 91 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 RNA5SP99-201ENST00000364020 114 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 RNU6-1180P-201ENST00000364935 107 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 RNU6-730P-201ENST00000383954 104 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 RNU6-444P-201ENST00000383988 108 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 TAF9BP2-201ENST00000400856 499 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 U3.37-201ENST00000408528 213 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 RN7SKP223-201ENST00000410582 62 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AL645638.1-201ENST00000440519 361 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms