Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 MAPK10-320ENST00000641462 6696 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 RNU5A-8P-201ENST00000364102 114 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 RNY1P12-201ENST00000364251 105 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 Y_RNA.356-201ENST00000365475 113 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 RNU6-637P-201ENST00000384050 107 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 RNU6-692P-201ENST00000384496 107 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AL356776.1-201ENST00000406574 447 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 RNU6-516P-201ENST00000411381 104 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 CTSL3P-202ENST00000412179 788 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AC244098.2-201ENST00000422068 99 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 ISCA1P6-201ENST00000427740 390 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AL358934.1-201ENST00000432346 324 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 ISCUP1-201ENST00000454451 448 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 MTND1P12-201ENST00000455231 147 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 RNU7-59P-201ENST00000459101 61 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 RPL38P1-201ENST00000460914 211 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 MTCO3P9-201ENST00000506989 781 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 RNA5SP519-201ENST00000516480 119 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 Vault.3-201ENST00000516676 95 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AF235103.2-201ENST00000525753 346 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 FAM92A1P1-201ENST00000528023 890 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 DEFB109D-201ENST00000529497 240 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AC120057.2-201ENST00000571520 271 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AC005498.1-201ENST00000592125 465 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AC079587.1-201ENST00000603846 277 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AC018695.5-201ENST00000605872 315 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AC009233.1-201ENST00000616477 371 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AL603758.1-201ENST00000618654 241 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 MAPK10-286ENST00000641208 8747 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 AC000123.3-201ENST00000624029 4975 ntBASIC4.41□□□□□ -1.7
LRFN3Q9BTN0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
LRFN3Q9BTN0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LRFN3Q9BTN0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LRFN3Q9BTN0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
LRFN3Q9BTN0 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.7
LRFN3Q9BTN0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
LRFN3Q9BTN0 RNU6-877P-201ENST00000383868 107 ntBASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 AC127391.1-201ENST00000411737 98 ntBASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 EI24P1-201ENST00000416584 867 ntBASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 SDCBPP3-201ENST00000419629 891 ntBASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 RPL7P28-201ENST00000437739 740 ntBASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 USP9YP15-201ENST00000442391 422 ntBASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 RPL5P30-201ENST00000465511 891 ntBASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 RN7SL293P-201ENST00000481765 281 ntBASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 ENPP7P11-201ENST00000505915 627 ntBASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 AP003181.2-201ENST00000528941 181 ntBASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 MIR3118-1-201ENST00000581787 76 ntBASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 AC135507.2-201ENST00000612443 309 ntBASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 AL133173.2-201ENST00000614270 90 ntBASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRFN3Q9BTN0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 CPHL1P-201ENST00000461341 3407 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 ADAM5-202ENST00000399789 1942 ntBASIC4.39□□□□□ -1.71
LRFN3Q9BTN0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms