Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.91□□□□□ -1.94
NPAS2Q99743 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.91□□□□□ -1.94
NPAS2Q99743 FAM35CP-201ENST00000554755 2470 ntBASIC2.91□□□□□ -1.94
NPAS2Q99743 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.91□□□□□ -1.94
NPAS2Q99743 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.9□□□□□ -1.94
NPAS2Q99743 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
NPAS2Q99743 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
NPAS2Q99743 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
NPAS2Q99743 RNU6-1197P-201ENST00000391183 107 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 HMGB1P17-201ENST00000403495 628 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 AL451074.5-201ENST00000415894 435 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 CCDC58P2-201ENST00000417131 366 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.9□□□□□ -1.95
NPAS2Q99743 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.9□□□□□ -1.95
NPAS2Q99743 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.9□□□□□ -1.95
NPAS2Q99743 RPS29P6-201ENST00000438196 145 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 AL592447.1-201ENST00000447592 540 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 AC093392.2-201ENST00000450682 337 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 TRGVB-201ENST00000453257 471 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.9□□□□□ -1.95
NPAS2Q99743 AL031183.1-201ENST00000457667 207 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 AC006445.2-201ENST00000510061 472 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 AC103783.1-201ENST00000520506 373 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 AC022861.1-201ENST00000522981 663 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 SLC2A13P1-201ENST00000531560 322 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 LRRC6P1-201ENST00000532188 885 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.9□□□□□ -1.95
NPAS2Q99743 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.9□□□□□ -1.95
NPAS2Q99743 OR4K8P-201ENST00000578842 1048 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.9□□□□□ -1.95
NPAS2Q99743 AL020991.1-201ENST00000612314 373 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 AC024257.5-201ENST00000612739 531 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 AC243773.3-201ENST00000613270 256 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.9□□□□□ -1.95
NPAS2Q99743 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NPAS2Q99743 OR1S1-201ENST00000624470 978 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 AP000676.4-201ENST00000624659 623 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
NPAS2Q99743 AL356473.1-201ENST00000406203 1408 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.9□□□□□ -1.95
NPAS2Q99743 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NPAS2Q99743 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.9□□□□□ -1.95
NPAS2Q99743 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NPAS2Q99743 AC005539.1-201ENST00000443768 1479 ntBASIC2.9□□□□□ -1.95
NPAS2Q99743 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
NPAS2Q99743 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.9□□□□□ -1.95
NPAS2Q99743 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.89□□□□□ -1.95
NPAS2Q99743 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
NPAS2Q99743 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NPAS2Q99743 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAS2Q99743 AC073325.2-201ENST00000339545 159 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NPAS2Q99743 RNU4-51P-201ENST00000364206 140 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 snoZ40.1-201ENST00000364540 72 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 RNU6-224P-201ENST00000384055 107 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 UBA52P6-201ENST00000399822 382 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.89□□□□□ -1.95
NPAS2Q99743 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAS2Q99743 MRPS36P1-201ENST00000421291 307 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.89□□□□□ -1.95
NPAS2Q99743 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.89□□□□□ -1.95
NPAS2Q99743 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.89□□□□□ -1.95
NPAS2Q99743 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.89□□□□□ -1.95
NPAS2Q99743 RNF2P1-201ENST00000442955 1010 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 AL049714.1-201ENST00000466686 347 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.89□□□□□ -1.95
NPAS2Q99743 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
NPAS2Q99743 RPL30P5-201ENST00000494923 336 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 AC080014.1-201ENST00000496877 1201 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 AC109464.2-201ENST00000510242 943 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 AC119751.5-201ENST00000514077 770 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAS2Q99743 RNA5SP76-201ENST00000516277 87 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 RN7SKP31-201ENST00000516354 278 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 RNU1-103P-201ENST00000516502 125 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.89□□□□□ -1.95
NPAS2Q99743 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.89□□□□□ -1.95
NPAS2Q99743 OR7K1P-201ENST00000546439 926 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NPAS2Q99743 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAS2Q99743 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NPAS2Q99743 MIR3609-201ENST00000582661 80 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.89□□□□□ -1.95
NPAS2Q99743 NUTF2P8-201ENST00000604593 363 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 AC024060.1-201ENST00000607052 494 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 AC135507.2-201ENST00000612443 309 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NPAS2Q99743 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.89□□□□□ -1.95
NPAS2Q99743 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.89□□□□□ -1.95
NPAS2Q99743 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPAS2Q99743 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NPAS2Q99743 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
NPAS2Q99743 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPAS2Q99743 RNA5SP139-201ENST00000364340 117 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 SNORA44-201ENST00000384584 132 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
NPAS2Q99743 RPS3AP24-201ENST00000407896 734 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 RNA5SP344-201ENST00000411081 104 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 AL161449.1-201ENST00000414531 1199 ntBASIC2.88□□□□□ -1.95
NPAS2Q99743 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms