Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AL731532.1-201ENST00000623972 4236 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AC232271.1-201ENST00000602455 2715 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 U3.2-201ENST00000362981 210 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 RNVU1-3-201ENST00000364313 161 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 RNU6-1329P-201ENST00000365664 107 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AL023284.3-201ENST00000407767 334 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 U3.42-201ENST00000408746 214 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AC006946.1-201ENST00000429106 328 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AC068287.1-201ENST00000430283 295 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AC073410.1-201ENST00000435125 589 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 DAP3P1-201ENST00000441522 278 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 RPS17P13-201ENST00000448974 407 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AL389915.2-201ENST00000454576 441 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 snoU13.29-201ENST00000459370 104 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AC083795.1-201ENST00000491760 320 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 HMGB1P21-201ENST00000502313 581 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AC100870.1-201ENST00000522035 505 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AC126177.5-201ENST00000549599 178 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AMZ2P1-203ENST00000565833 850 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AC011487.3-201ENST00000593607 453 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AC004158.1-201ENST00000564508 4319 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AC009951.1-201ENST00000623674 2614 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AC010624.4-201ENST00000597606 1351 ntBASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.52□□□□□ -1.53
CNTNAP3BQ96NU0 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 Z95114.1-201ENST00000624264 14574 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 AC138393.1-203ENST00000327086 343 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 RNU6-1130P-201ENST00000365434 107 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 Y_RNA.439-201ENST00000384119 94 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 MRPS21P2-201ENST00000424704 264 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 AC092162.1-201ENST00000432828 434 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 HSPD1P21-201ENST00000436541 245 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 RPS27AP1-201ENST00000475545 471 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 AC018437.1-201ENST00000492214 406 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 AC010469.2-201ENST00000496412 480 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 RNU6-64P-201ENST00000517119 105 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 AL133271.1-201ENST00000538229 291 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 RPL23AP84-201ENST00000571193 464 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 MIR5701-3-201ENST00000578890 82 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 MIR4284-201ENST00000578924 81 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 MIR4273-201ENST00000582824 84 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 MIR4293-201ENST00000584305 78 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 MIR5701-1-201ENST00000585138 82 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 MIR5701-2-201ENST00000615634 82 ntBASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CNTNAP3BQ96NU0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms