Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CCDC42Q96M95 ZNF90P1-201ENST00000480493 1951 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CCDC42Q96M95 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC42Q96M95 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC42Q96M95 RNA5SP387-201ENST00000364226 106 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 RNA5SP37-201ENST00000365420 130 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.36□□□□□ -2.03
CCDC42Q96M95 MIR524-201ENST00000385242 87 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC42Q96M95 ATP5F1P6-201ENST00000402768 767 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 AL136372.1-201ENST00000403060 228 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CCDC42Q96M95 AC096664.2-201ENST00000411843 406 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC42Q96M95 NDUFB4P6-201ENST00000436819 366 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC42Q96M95 AL121871.1-201ENST00000443413 436 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 AC005002.1-201ENST00000447458 540 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 HMGN3P1-201ENST00000453847 193 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 AC096576.1-201ENST00000489014 359 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 AC079804.2-201ENST00000490376 200 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC42Q96M95 GTF2IP9-201ENST00000502460 301 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC42Q96M95 SLC25A15P5-201ENST00000508033 253 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC42Q96M95 SNORA70.16-201ENST00000516390 95 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 HIGD1AP6-201ENST00000521833 279 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC42Q96M95 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC42Q96M95 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC42Q96M95 AP004247.3-201ENST00000608682 624 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 AC040168.1-201ENST00000623594 991 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC42Q96M95 AP003400.6-201ENST00000624698 740 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC42Q96M95 MFSD8-245ENST00000641743 948 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC42Q96M95 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC42Q96M95 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC42Q96M95 SNORA70.4-201ENST00000365509 134 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 SNORA6-201ENST00000384033 151 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 SNORA51.11-201ENST00000384442 131 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 MIR649-201ENST00000384843 97 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 MIR221-201ENST00000385135 110 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC42Q96M95 HMGB1P11-201ENST00000413899 637 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC42Q96M95 AC009963.1-201ENST00000417265 157 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 PAICSP7-201ENST00000419829 962 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 AC005005.2-201ENST00000420779 380 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC42Q96M95 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC42Q96M95 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC42Q96M95 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC42Q96M95 RNF2P1-201ENST00000442955 1010 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC42Q96M95 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC42Q96M95 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC42Q96M95 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC42Q96M95 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC42Q96M95 RNA5SP471-201ENST00000516971 106 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC42Q96M95 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC42Q96M95 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC42Q96M95 MIR3200-201ENST00000580767 85 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC42Q96M95 AC016542.1-201ENST00000608259 493 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 AL161629.2-201ENST00000615347 275 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC42Q96M95 AC027309.3-201ENST00000623419 351 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 AC093591.3-201ENST00000634516 308 ntBASIC2.35□□□□□ -2.03
CCDC42Q96M95 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC42Q96M95 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC42Q96M95 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC42Q96M95 RNU6-921P-201ENST00000384361 107 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 SNORA48.3-201ENST00000391081 134 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 TATDN1P1-201ENST00000414123 891 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 AL035410.1-201ENST00000427409 427 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC42Q96M95 RPS20P24-201ENST00000457473 361 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 VPS26AP1-201ENST00000483197 979 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC42Q96M95 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC42Q96M95 AC025768.1-201ENST00000510057 267 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 RNA5SP200-201ENST00000516360 103 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC42Q96M95 BNIP3P33-201ENST00000598912 569 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 NRBF2P5-201ENST00000603087 788 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 AC079089.3-201ENST00000603094 673 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 AL136363.1-201ENST00000605349 337 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 AC112503.2-201ENST00000609005 552 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC42Q96M95 MIR6132-201ENST00000622083 109 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 AP003485.2-201ENST00000623636 610 ntBASIC2.34□□□□□ -2.03
CCDC42Q96M95 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CCDC42Q96M95 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC42Q96M95 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms